KEGG   Daucus carota (carrot): 108203392
Entry
108203392         CDS       T05350                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108203392
Transcription machinery [BR:dcr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     108203392
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 Amidase
Other DBs
NCBI-GeneID: 108203392
NCBI-ProteinID: XP_017227798
UniProt: A0A162AM41
LinkDB
Position
1:53158154..53161175
AA seq 553 aa
MGIGFRLNFRWASSVRYPYYCTTSSSWPSSYSFRAMEASYDTTRVSFPYFVLGEIETMHN
DLPRVHSCASAAQTLSNNYLETEHISIRKSSGGDLSCIISSSFRKPGSATSAEASKLSHF
GVLMNNLSMLEKTFADSDVLRLENDILSQLDRLGALKLFHTCLSRTRSRPGNSSVSEDIE
EHQMESHVNADQMAKIVVSSGKKEKRKAKRVKSSWNEKDFYLLPSNSKPKHQHQNLSSPG
KSSKYSGSRPKVARNEAELTVGVKLVANLERIKMQLEKETGETASLSSWAEAANIDKKTL
QQNLHFGCYCKDELLRSTRSLILYIARNYRGVGVGFEDLIQAGSIGVLQGAERFDHTRGY
RFSTYIQYWIRKSILMLVERNCRGVRIPYALSKAVKKIQKARKTLSNSLGTYPDDNEIAE
STGLSLSKIAAASNCLRVVGSLDQRIGDFTSVKYLELMPDTSIKGPEETVMREHMLKDMY
DLLAELDPRERQVLLLRLGLQGHHCMSLQEIGRLFSVSKEWIRKIERTALRKLRDQETLH
SLSHYLYMNHMNQ
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgggcattggattcaggctcaacttcagatgggcttcttcagttagatatccatactat
tgcaccacctcctcatcttggccttcatcttattcatttagagcaatggaggcttcctat
gacacaacaagagtatcctttccatattttgttctgggagagattgaaactatgcacaat
gatcttccgagagtgcatagttgtgcatctgctgcacagaccttatcgaataattactta
gaaaccgaacatataagtatcagaaagagttctggtggtgacttaagttgcattattagc
agtagttttcggaaacctggttctgcaacaagtgctgaggctagcaaattatcacatttt
ggagtactaatgaataatcttagtatgttggagaagacgtttgctgattcagacgtgctg
aggctggagaacgatatattatcacaattggacaggcttggagctcttaagttgttccac
acttgcctctccaggacgagatcacggcctggtaattcatcagtgtctgaggatattgaa
gagcatcagatggaaagccatgtgaacgctgatcagatggctaagattgttgtttcctca
ggaaaaaaggaaaagaggaaagcaaagagagtgaaatcatcgtggaatgagaaagatttt
tatctgttgccatcaaattctaaacctaagcaccaacatcagaacttgtcttctcctgga
aaatcatcaaaatacagtggctcaaggcctaaagtcgcgaggaatgaggctgaattgaca
gtaggcgtgaagttagttgcgaatttggaaagaattaaaatgcagttggaaaaagaaaca
ggcgaaacagctagcttgagtagctgggccgaagctgctaacatcgacaagaagaccttg
cagcagaatctgcacttcggttgttattgcaaggatgagctcctgagaagcacaagatct
ttgattctttacattgcaaggaactataggggcgtcggagtgggttttgaagatttaatt
caggcaggaagcatcggtgtcctgcaaggtgcagaaaggttcgaccacaccagggggtat
cggttctctacatacatccagtactggataagaaagtccatattgatgcttgttgagcgg
aattgcagaggagttcggattccttatgcattgagcaaagcggtgaagaagatacagaaa
gctagaaagaccctgagtaacagccttgggacttatccagatgacaatgaaatagcagag
tccacaggcctgtccttgtctaaaattgcagcagctagtaactgcctgagagtcgtcggt
tctcttgatcagagaatcggggatttcaccagtgtcaaatatctggaactcatgcccgat
acctcgatcaagggtcctgaagaaactgtcatgagggagcacatgttgaaagacatgtat
gatcttctagccgaattagatcccagggaacgacaggttctgctactgaggctcgggctt
cagggccatcactgcatgtcgcttcaagagatagggaggctattctctgtgagcaaagaa
tggatacgaaaaatagagagaacagctttaagaaaactcagagatcaggaaactcttcat
agtctaagccattatctgtatatgaaccatatgaatcagtaa

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