Daucus carota (carrot): 108203442
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Entry
108203442 CDS
T05350
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108203442
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108203442
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108203442
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108203442
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108203442
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108203442
Prokaryotic type
108203442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108203442
NCBI-ProteinID:
XP_017227860
LinkDB
All DBs
Position
1:complement(44267246..44293329)
Genome browser
AA seq
971 aa
AA seq
DB search
MALPNPSLLSSSSLYRLNPLLFSQRRRSITLSSLHFTSLKPRLFTASASSESDVFTSPEV
SKSFDFTNEERIYNWWESQGYFKPNFDRESDPFVVPMPPPNVTGSLHMGHAMFVTLEDIM
VRYHRMKGKPTLWLPGTDHAGIATQLVVERMLASEGIKRSELGRDEFTKRVWEWKEKYGG
TITNQIKRLGASCDWTKERFTLDEQLSRAVIEAFIRLHEKDLIYQGSYMVNWSPNLQTAV
SDLEVEYSEEPGFLYYIKYRVAGGSRSDFLTIATTRPETLFGDTALAVHPEDERYSKYVG
MNAIVPQTYGRHIPIISDKYVDKEFGTGVLKISPGHDHNDYLLARKLGLPILNVMNKDGT
LNDVAGLYSGLDRFEVREKLWKDLEEIDLAVEKKPYTLRVPRSQRGGEIIEPLVSKQWFV
TMEPLAEKALKAVEKGELNIMPDRFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKD
CEEEYIVARSSDEAITKAREKYGKNVEIYQDPDVLDTWFSSSLWPFSTLGWPDVSAEDFK
RFYPTSMLETGHDILFFWVARMVMMGIELTGKVPFSNIYLHGLIRDSQGRKMSKTLGNVV
DPIGTMQEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPKQND
TSALSTMLVYEFNKDECLLTLPLPECWVVSKLHILVDTVTTSYDKFFFGDVGREIYDFFW
SDFADWYIETSKARLYNSDGGAVSSVAQAVLLYVFENILKMLHPFMPYVTEELWQALPNR
TEALIVSSWPQTSLPRHTNSIKRFENFQALTRAIRNARAEYSVEPAKRISASIVANSEVT
QYISKEKEVLALLSRLDLQSIHFTDSPPNDANQSVHLVAGEGLEAYLPLADMVDITAEVQ
RLSKRINKMQKEYDGLVARLSSPEFIEKAPREIIDGIKEKASEAEEKLTLTKNRLTFLES
TTVVAGSIHPA
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgccaaacccctcccttctatcatcttcctccctctacagactcaatcctctt
ctcttctctcaacgtcgtcgtagcatcacactctcctcactccatttcacttccctcaaa
ccaaggcttttcacagcttccgcttcttcggagagcgatgtgtttacttctccggaggtc
tctaaatcgttcgatttcactaatgaagaacgaatatacaactggtgggaatctcaaggt
tatttcaagccaaactttgacagagaaagtgatccctttgtggtcccaatgccacctcct
aatgtcactggttcattgcacatggggcatgctatgtttgtgactctagaggatatcatg
gttagataccatcgtatgaagggcaagcctacactttggcttcctggaactgatcatgct
ggcattgcaactcagttggttgtggaaagaatgttggcttctgaaggaataaaaagatct
gagcttggcagagacgagttcacaaagcgagtttgggagtggaaggagaagtatggtgga
actatcacaaaccaaataaagagactcggtgcttcttgtgattggactaaagaacgtttc
acgcttgatgagcaactaagtcgagctgtaattgaggctttcattaggctgcacgagaaa
gaccttatctatcaaggatcctacatggtcaattggtctcctaacttacagactgctgtc
tctgacttggaagttgaatattctgaagaacctggctttttgtattatatcaagtatcgc
gttgctggaggttcaaggagcgattttctgacaattgcaacaacgcgtccagagacttta
tttggtgatactgctctggcagtgcatcctgaggatgaacgctattctaaatacgtagga
atgaacgctattgttccccagacatatggacgtcatatacctatcatctctgacaagtat
gttgataaagaatttggcactggagtattaaagataagccctggccatgatcacaatgac
taccttcttgctcgaaaacttggtctgccaatactcaatgtaatgaacaaagatgggacg
cttaatgatgttgctgggctgtacagtggtctcgatcgatttgaagtgagggaaaaactc
tggaaagatctggaggagatagacttagcagttgaaaaaaagccttatactttgcgagtt
cctagatcccaacgcggtggagaaataattgagcctttggtgagcaagcaatggtttgta
accatggagcctttggctgagaaagccctcaaggcagttgaaaaaggagaactaaacatc
atgcctgatagatttgagaagatatataatcactggcttacaaatatcaaggattggtgt
ataagtcggcagctgtggtggggacatcgcataccagtttggtacattgtgggcaaagat
tgtgaagaagagtatatagttgctagaagttcagatgaagctattactaaagctcgtgag
aagtatggaaaaaatgttgaaatatatcaggacccagatgtccttgacacttggttttcg
agttctctttggccatttagtactttgggatggcctgacgtttcagctgaagatttcaag
cggttttatccaacatcaatgcttgaaacagggcatgacatcttgttcttctgggtggca
cgtatggtgatgatgggaattgagttgactgggaaggttccattttcaaatatatatctt
catggacttatcagggattctcaagggaggaaaatgtccaaaacattaggcaatgttgtg
gatcccattggtacaatgcaagaatttggcacagacgcgctaagattcacacttgctcta
ggaactgctggtcaggatcttaatttgtcaactgagagattgacctccaacaaagcattc
acaaataaattatggaatgcaggcaaatttgtgctgcaaaatttgcctaaacaaaacgat
acatctgctcttagcactatgctagtctatgagtttaataaggatgaatgtctgcttact
ctacccttaccagagtgttgggtggtctctaaacttcatatacttgttgacacggttacc
acaagttatgacaagttcttctttggagatgttggaagggaaatatatgatttcttttgg
agcgactttgctgattggtatattgaaacaagtaaagctcgcttgtacaattctgatggt
ggggcagtgtcatctgtagcgcaggcagttctcttgtatgtttttgagaacatattgaaa
atgctacatccattcatgccatatgttactgaagagttgtggcaggctctacccaatcgg
acggaagctcttatagtttcaagctggccacagacttcacttccaaggcataccaactcc
atcaaaagatttgaaaacttccaagcactgaccagagcaattagaaatgctcgagccgaa
tactctgttgagccagcaaagcgcatatctgcatccatagttgcgaactctgaagtcact
caatatatctctaaagagaaagaagttctagctcttctctccagactagatctgcaaagc
attcacttcacagactctcctccaaatgatgcaaatcaatctgtccatcttgttgctggt
gagggactggaagcatatcttcctcttgccgatatggtagatatcactgcagaagttcag
cgtctttctaagcgcataaataagatgcaaaaagagtatgatgggcttgtggcacgttta
agttctcctgaattcatagagaaagctcctagagaaattattgatggcattaaagaaaaa
gcatcagaagcagaagagaagttaactcttaccaagaaccggctgacgttcctcgaatca
acaactgtggttgctggtagtattcacccagcctag
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