Daucus carota (carrot): 108203481
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Entry
108203481 CDS
T05350
Name
(RefSeq) myosin-15 isoform X1
KO
K10357
myosin V
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108203481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108203481
04131 Membrane trafficking [BR:
dcr04131
]
108203481
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108203481
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108203481
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108203481
mRNA cycle factors
P-body specific factors
108203481
Membrane trafficking [BR:
dcr04131
]
Others
Actin-binding proteins
Myosins
108203481
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108203481
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108203481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Flp1_like
Zeta_toxin
ABC_tran
AAA_19
Motif
Other DBs
NCBI-GeneID:
108203481
NCBI-ProteinID:
XP_017227922
UniProt:
A0A166J2F5
LinkDB
All DBs
Position
1:complement(52375325..52401787)
Genome browser
AA seq
1514 aa
AA seq
DB search
MSLRRGSKVWVQDRDSAWVAAEVTDFIGKQVQLLTEFNKKVLILPDKLFLRDEEADHGGV
DDMTKLTYLNEPGVLDNLRRRYALNEIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAP
FGELSPHVFAVADASYRAMINESQSQSILVSGESGAGKTETTKLIMQYLTYVGGRAASDD
RTVEQQVLESNPLLEAFGNARTSRNDNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRV
VQITDPERNYHCFYQLCASGRVADSYKLAHPRNFHYLNQSNVYELEGVSSAEEYMRTRRA
MDIVGISHEEQEAIFRTLAAILHLGNIEFAPGKEHDSSVIKDQNSNFHLQMAANLFMCDL
NLLLATLSTRSIQTREGNIVKALDCNAAVASRDALAKTVYSRLFDWLVEKINRSVGQDTN
SRMQIGVLDIYGFECFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRKEEINWSYIE
FIDNQDVLDLIEKKPIGLIALLDEACMFPKSTHETFSNKLFRNCGSHPRLDKAKFCETDF
TLSHYAGKVTYQTDTFLDKNRDYIVVEHLNLLSSSKCSFVSGLFPSVAEESTRSSYKFSS
VASRFKQQLQALMETLSATEPHYIRCVKPNSLNRPQKFENQSILHQLRCGGVLEAVRISL
AGYPTRKTYNEFVDRFGLLAMEIMEGCYDEKSMTEKILKKLKLENFQLGKTKVFLRAGQI
GILDSQRAEVLDVAAKRIQGRLKTFIKRREFIANRNSAVSLQAYCRGHLARKTYAAIREA
AAAITIQKYVRGWLLRHAYMQFCSSALLMQACIHGFLTRQRFLRRKRHKAATIIQAQWRM
RKVRAAYSHRQSNIIAIQCLWRRKLARRELRKLKKEANEAGALRLAKTKLERQLDDLTWR
LQLEKRLRVSNEEVKGVEITKLQKTVESLSLELDAAKLATVNECNKNAVLQNQLMLSMKE
KSSLERELSSLADLRNENAYLKNTLNIFQAKNLALEQDLAKAKQDTDDTVKKLREVEQTC
SQLQKDLRSLEEKLLNIDGENLVLRQKTLISTPKSNLPGFARPFMDKFSGAVAFPSIDQR
STFESPTPTKIIQPPSQGQSDSRRAKLTLEKHQENYDILSRCIRENLGFKDGKPVAACVI
YKCLLHWHAFESERTAIFDHIIEEINTALKAEDEDSILPYWLSNASALLCLLQRNIRSNG
FLSASSKRSAGSTGLNGRIAQGLKSPFKYIGYEDGLSHTEARYPAILFKQQLTACVEKIF
GLIRDNLKKEISPLLGLCIQAPKIQRVHGGKSSRSPGTAPQQSPGSQWDSIIKFLDSLMN
RLRSNHVPSFFIRKLATQVFSFINISLFNSLLLRRECCTFTNGEYVKSGLAELEKWIVNA
KDEFAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKY
GTQSVSNEVVSEMREILNKDSQNLTSNSFLLDDDLSIPFSTEDIYMAIPQIDPSDIEVPP
VLAEHPSVQFLLSK
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcgcaggggttcgaaagtgtgggtgcaggatagagactccgcctgggttgcg
gctgaggtcaccgattttattggcaaacaagttcaactcctcactgaatttaacaagaag
gtactgattctgccggataagttgtttttgagagatgaggaggccgatcatggaggagtt
gatgacatgactaaattgacatatttgaatgagcctggtgtgcttgataacttgaggagg
agatacgctctcaatgaaatctatacttacacaggaagcattttaattgctgtaaatcca
tttaccaagcttccccatctatacaatgtgcacatgatggagcaatataagggggctcct
tttggcgagttaagtccccatgtttttgctgttgctgatgcatcttacagagcaatgatt
aatgagtctcagagccagtcaatattagttagtggagaaagtggagccgggaaaaccgag
acaacaaaattgataatgcaatatcttacttatgttggtggtcgtgctgccagtgatgat
agaacagttgaacaacaagttttagaatcgaacccactgttggaggcatttggtaacgct
cgaacttctagaaatgataattcaagtcgttttggaaagtttgtggagattcaatttgat
aaaagtggtagaatatcaggagctgcaattagaacctatcttctcgaaagatctcgcgtg
gttcaaataactgacccagaaaggaattaccattgcttttaccagctttgtgcttctgga
agggttgcagattcatacaagctagctcatccacgcaacttccactacttaaaccagagt
aacgtttacgaattagaaggagtaagcagtgccgaggaatacatgcggacgagaagggct
atggatattgttggtatcagtcacgaagaacaggaagcgatatttcggactctagctgct
attctgcatcttggaaatattgagtttgcccctggcaaagagcatgactcatcggttatt
aaggatcagaactctaatttccacctgcagatggctgctaatcttttcatgtgtgacttg
aatcttttgcttgctacactctcaacccgttcaattcagacccgtgaaggaaatattgtc
aaggctcttgactgtaatgctgctgttgcaagccgcgatgctttggcaaagactgtttat
tctcgcctatttgattggctggttgagaagattaatagatcagttgggcaagatactaat
tctcggatgcaaataggggtattggacatatatggatttgagtgctttaagcataacagt
ttcgagcagttctgcataaattttgcaaatgaaaagcttcagcagcatttcaatgagcat
gtatttaagatggagcaggaagagtatcgcaaggaagaaatcaattggagctatattgaa
tttattgataaccaggatgtcctggatctgatagaaaagaagcctataggactaattgct
cttctggatgaagcttgcatgtttccaaaatcaactcatgaaacattttcaaacaagctt
tttcgcaattgtggcagccaccctagattggacaaggcaaaattttgtgaaacagatttc
actctctcccattatgctggcaaggtcacatatcagacggatacatttctagacaaaaat
cgtgactatatcgtggttgaacaccttaatcttttatcctcctccaaatgctcctttgtt
tctggtctttttccttctgtagcagaggaatctacaagatcctcatacaagttttcttca
gtggcgtctcggtttaagcaacaacttcaagctcttatggagaccctgagtgcaacggag
cctcattatatccgatgtgtaaagccaaactctttgaacaggcctcaaaaatttgaaaat
caaagtatattgcatcagttacgctgtgggggagttttagaggctgttcggataagtcta
gcaggttatcccactcggaagacttataatgaatttgtagatcgttttgggctgcttgcc
atggaaataatggaaggatgttatgatgaaaaatccatgactgagaaaatattaaagaag
ttaaagcttgagaatttccagttgggaaagactaaagtctttctcagggctggccagatt
ggtattttagactctcaacgcgcggaggtccttgatgttgctgcaaagcgtattcaaggc
cgattgaaaacatttatcaaacgcagggaattcattgcgaatcggaattctgcagtttct
ctacaagcatattgcagagggcatcttgctcgtaaaacatatgctgcaataagggaggcc
gcagctgccattacgattcagaaatatgtaaggggatggctgctcaggcatgcatatatg
cagttctgttcctcggccctacttatgcaggcatgcattcacggtttcttgactcgtcag
agatttttgcgtaggaaaagacataaggctgctactattattcaggctcaatggaggatg
cgcaaggtgcgtgctgcttatagtcatcgacaatctaacataatagcaattcagtgccta
tggaggcgaaaattggcaagaagagagcttcggaaacttaaaaaggaggctaacgaggct
ggtgctcttcgccttgctaaaacaaagcttgagaggcagttggatgatcttacctggcgg
ttgcaattggaaaaaagattgcgggtatcaaatgaagaagtaaagggagtggaaatcaca
aaacttcagaagactgtggaatcgttaagtcttgaattggatgctgccaagttggccaca
gttaatgaatgcaacaagaatgctgtactgcaaaatcagctgatgttgtcgatgaaggaa
aaatcatctctggaaagagagcttagttcattggctgatctaagaaatgaaaatgcatat
ttaaagaataccttaaacatctttcaggcaaagaatttggcacttgaacaagatcttgct
aaagctaaacaagatactgacgatactgttaagaagttgagggaagttgaacaaacatgc
tcccagttacagaaggatttgcgaagtttggaggagaagctcttaaacatagatggcgag
aatctggttctacggcaaaaaacattgatttcaactccaaaaagcaacttgcctggcttt
gctagaccatttatggataagttctctggtgcagttgcttttccgtccattgatcagaga
tctacgtttgaatcacctacacccaccaaaattattcaaccgccttcacaaggtcaatct
gattcacggcgtgcaaagttaactttggaaaaacatcaggagaattatgacatcctctca
cggtgcatacgggagaatttgggattcaaagatggcaaaccagttgctgcttgtgttatt
tataaatgccttctacattggcacgcctttgaatctgagagaacggccatctttgaccat
attattgaggaaatcaatactgctctgaaggcagaggatgaggattccatattgccttac
tggctgtctaatgcatcggcacttctatgcctcctgcagagaaatatacgttctaatggg
ttcttgtctgcaagttctaagcgttctgctggttccaccgggctaaatgggaggattgca
caaggtctaaaatctcctttcaaatatattggatacgaggatggcttgtcgcacacggaa
gcaagatatcctgctattttatttaaacaacagttgactgcctgtgtggagaagattttt
ggtttgattcgtgataatctgaagaaagaaatatctccattgttgggtctctgcatccag
gcacccaaaattcaaagagttcatggtggaaaatcatcgagatcacccggaactgctcct
caacaatcacctggtagtcaatgggatagcatcatcaaatttctggattcccttatgaat
cgtctacgttcaaatcatgttccctcatttttcattcgtaaattggcgacccaggttttc
tcgttcatcaatatttcactctttaatagtcttctattgcggagagaatgttgcacgttt
acaaatggggaatatgtgaaatctggtctggcagagttggaaaaatggattgtcaatgca
aaggatgagtttgcaggaacgtcctggcatgaactaaattatattcggcaagctgttggt
tttctggtaatccaccaaaagagaaagaaatcgcttgaagagataaggcaagatctttgc
ccggcgttgaccgtgagacaaatttatcggataagtactatgtactgggatgataagtat
ggaactcaaagtgtctcaaacgaggtagtcagtgaaatgagagagattttgaacaaagat
tctcaaaatttaacatccaattcatttcttctggatgatgatttgagtattccattttcc
accgaagacatatatatggcgattcctcaaatagatccttctgatatagaagttccacca
gtcttggctgaacatccgtctgtacagtttttgctgagcaagtag
DBGET
integrated database retrieval system
