Daucus carota (carrot): 108203490
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Entry
108203490 CDS
T05350
Name
(RefSeq) protein transport protein SEC24 A
KO
K14007
protein transport protein SEC24
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108203490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108203490
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108203490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
108203490
NCBI-ProteinID:
XP_017227947
UniProt:
A0AAF0W756
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Position
1:37548272..37559748
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AA seq
1021 aa
AA seq
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MGTEDPSRKNFPYRPAASPFSSPQSTMPFLSSPPVVGSQGPIGGSNSSSVRPSTTPASQT
SPFISSRPAVGPEPSNFRPGPPVRSTTPFMNPSQPSYSQTPAGPFQRAPGQQFPSNTQVP
PPRTSPMGQQASPMPTNHSAASYTSMPALQNPNYQSSAESSYFARPNLQQSSPSMRPYFA
PGTQPNAAAQTAPVPSASFLNHQNNYVQPPPVAPTPFISPQHGYAPPPPGATLGPYSMDK
IRAPSSTASLGPAQGLAEDFNSLSIGSVPGSFDPGLDSKALPRPLDGDLEPKSYAEMYPL
NCNSRYLRLATSAIPNSQSLASRWHLPLGAVVCPLAEAPTGEEVPIVNFATTGIVRCKRC
RTYINPYVTFTDGGRKWQCNICTLLNEVPGDYFAPLDAGGRRIDLDKRPELVKGSVEFVA
PTEYMVRPPMPPLYFFLIDVSISAVRSGVIEVVAQTIKSCLDTLPGYPRTQIGFITFDST
IQFYNMKSSLTQPQMMVVSDLEDIFVPLPDDLLVNLSESRSVVDAFLDSLPSMFQDNVNV
ESAFGPALKAAYMIMNQLGGKLLIFQNTLPSLGVGRLRLRGDDLRAYGTDKEHALRTPED
PFYKQMAAEFTKYQIAVNIYAFSDKYTDIASIGTLAKYTGGQVYYYPNFQATIHKERLQH
ELARDLTRETAWEAVLRIRCGRGVRFTSYHGNFMLRSTDLLALPAVDCDKAYAMQLCLEE
TLLTTQTVYFQVALLYTSSSGERRIRVHTAAAPVVADLGEMYRQADTGAIISLLGRLAIE
KSLTSKLEDARNSIQLRIVKALKEYRNLYAVQHRVGSRMIYPESLKFLPLYGLALYKSTA
LRGGYADAQLDERCAAGFTMMALPVKKLLKLLYPNLIRIDECLLKADALESTWKKVPLAA
DSLDPTGLYVYDDGFRFVVWFGRQLLPDIARNLLGEDYTTDYSRVSLYEHDNAMSRKLMK
ILKTFRETDPSYYQLCHLVRQGEQPREGFFLLVNLVEDQVGGMNSYLDWILQIHRQIQQN
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggggactgaagatcctagccgtaaaaatttcccgtacaggcctgctgcatcaccattc
tcatcgccgcaaagtacaatgcctttcttatcatctcctccagtggtcggatcccagggg
cccattggtggatcaaattcttcttccgttaggccatccacgacacctgcttctcagaca
tctccttttatatcctcaagacctgcagttggaccagaaccctcaaatttcagacctggg
ccaccagtaagatctactaccccatttatgaatccatcccaaccatcttatagccagact
cctgcaggaccttttcaacgtgcccctggacaacaatttccctcaaacacccaagtgccc
ccaccacgcacttcacctatgggtcagcaggcttctcccatgccaactaatcattctgca
gcttcttatacatccatgccagctttacaaaacccaaattatcaatcatctgcggaatca
tcttattttgctcggccaaatttgcagcaatcttcaccctcaatgaggccttattttgct
ccaggcacgcaacctaatgcagctgcacagactgcaccagtaccatcagcatcctttctt
aatcaccaaaataattatgttcaaccacctccagtagcacccaccccttttatctctcct
caacatggttatgccccacctcctccaggtgcaactttaggcccatattcgatggataaa
atacgagctccaagctctacagcctctttgggacctgctcagggtttagcagaagatttc
aactcattatctatcggttctgttccaggttcttttgatccaggacttgattctaaggcg
ttgcctcggccattagatggtgatttggaaccaaaaagttatgctgaaatgtatccgcta
aactgcaattctcgatatctaagacttgcgactagtgctataccgaattcccagtcttta
gcttccaggtggcatctgccccttggagctgttgtttgtcctctcgcagaagctcctact
ggggaggaagtgccaattgttaattttgctacaacgggtattgttcggtgtaaaagatgc
cgcacgtatatcaacccttatgtgacttttactgatggtggcagaaagtggcaatgcaac
atatgtactttgcttaatgaggtgcctggtgattattttgcccctctggatgctggtggg
agaagaatcgacttggataaacgtcctgaacttgttaagggtagtgttgaatttgttgct
ccaacagaatacatggtgcgaccgccgatgccaccactatatttcttccttattgatgta
tcaatatctgctgttagaagtggagttattgaggtggtggcacaaactatcaagtcttgc
ttggatactctacctggttatcctagaactcagatcggtttcataacttttgatagcaca
atacaattttataatatgaagtcatctttgacacagcctcaaatgatggtggtgtcagat
ctagaggatatatttgttcccttgccggatgatcttcttgtcaatttgtcagaatccaga
agtgtagttgatgcctttctggatagtctgccttccatgtttcaggacaatgttaatgta
gaatcagcttttggtccagctctaaaagccgcatatatgattatgaatcaacttggtggt
aaattgttaatttttcaaaatacactgccatctcttggcgttggtcgcttaaggttgcgt
ggtgatgatcttcgggcttatggaacagataaagaacatgcactaagaacaccagaagat
ccattttataaacagatggctgctgaattcaccaagtaccagatcgcagtaaacatatat
gcgtttagtgataagtacactgatatagcttctataggaactttagcaaaatatactggt
ggccaggtttattattatccaaacttccaggctaccattcacaaagaaaggttacaacac
gagttagcaagggatttgactagagaaactgcctgggaagctgtactgcggataagatgt
ggaagaggtgtgcgtttcacgtcttatcatggcaacttcatgttgagatcaactgattta
ttagcccttccggccgtagattgtgataaagcttatgccatgcagttgtgtcttgaggag
accttgctgacaactcagactgtgtattttcaagttgctctattatacacgtcatcatct
ggagaaaggcgtataagagtgcatacggcagccgcaccagtggttgcagatctaggagaa
atgtatcgccaagctgatactggtgccatcatttccttgcttggtagattagcaattgag
aaaagtctaacttctaagctggaagatgctcgaaattctatacaactgagaattgttaaa
gctctcaaagaatatcgaaatctctatgctgtgcagcatcgtgtggggagcaggatgata
tatccagaatccttgaaattcttgcccttgtatggattagcactatacaaatcaacagca
ctgcgtggtgggtatgctgatgctcaactcgatgaacggtgtgcagcaggattcaccatg
atggctttacctgtcaaaaaattattgaagcttctctatcctaatttgatacggatagat
gagtgtcttctgaaggctgatgcattggaaagcacttggaaaaaggtcccactagctgca
gacagcttggatcccaccggtctttatgtttatgatgatggttttaggtttgtagtatgg
tttggtagacaacttttacctgatattgcaaggaacctacttggcgaagactacactaca
gattactcgagggttagtctctacgagcatgacaatgcaatgtccaggaagctaatgaaa
atactgaagacttttagggagactgacccatcatattatcagctgtgtcatctcgtgaga
caaggtgaacagcccagagaagggttcttccttcttgtaaacctggttgaggaccaagtt
ggtggtatgaatagctatcttgattggatcctccaaattcataggcaaattcagcaaaat
gcctaa
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