Daucus carota (carrot): 108203711
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Entry
108203711 CDS
T05350
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108203711
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108203711
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108203711
Membrane trafficking [BR:
dcr04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
108203711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
108203711
NCBI-ProteinID:
XP_017228318
UniProt:
A0AAF0W1D8
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All DBs
Position
1:5517311..5537220
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AA seq
1010 aa
AA seq
DB search
MELGRYSLDLKRSPRKSFTSSPLSKSISDASTQSLSAILNNPTDATWTAWFSSPAVSPPD
FLAVNTTRPGSELTRPDFKPYVSSICEQFNRFEDIRKHGSEEDGVELDRSGGQGEALVAC
LREVPALYFKEDFELEDGGTFRAACPFSSVGENLVLQEKLSQYLDVVEVHLVKEIALRSN
SFFEAQGQLEGLNSRIVEGSSRIRELKETIWVLDSDLVDLARQVQELSSNKSNMLVLQQK
LRLIMNVNHALSALKLLVASADCAGALDITDDLRQLLDGDELTGLHCFRHLRDHVNGAVN
SINSILSAEFMRTSIQDTRDADSVILLQAKERAASLTNGDDDEISIVETDKVEDSNIREQ
LLPPIIGLLRTAKLPSVLRFYRETLTAEMKSAIKAVVVELLPVLLCRQSDLVYNQGERVA
DADGGGSSLASKLKTLSSDNFVQLLRTLFRIVWAHLVRADEVKKVIECIMCNLDGHYAAD
SVAAAIAVGTATSEASQETDAQVSPFLSYSLHRNTAMSPSNQGRGNDANYPLNISRNFRA
DVLRENMEAVFAACDVGHAKWAKILGVRAVLHSKLRLQEFLSIHKLTQDFITATEMIGGR
SAYSIRGTMQSQTKAFVDFHHNYRMDKIKAVLDQETWVEADVHDEFQRIAASLYIEEPVD
DGNADDTYNSLAGGKNESVSSNSVSVMADSQVADSVKPIDRTDSIEVSPDMTTQITLSSS
TRPTDSNSSDVRLSAQRNGATRTISFRGVHYHMVNCGLFVLKMLSEYIDTNNSLPALSSE
VVLRVVELLKFFNTRTCQLVLGAGAMQVSGLRSINSKHLALASQVISFTYAIIPEIRRIL
FYKVPETRQPLLLKEIDRVEHDYKGHRDEIHKKLVQIMRERLLYHLRGLPQIVDSWNRTE
DTDPQPSNFARSVTKEVGYLQRVLSRTLHDADVQAIFRQVVVIFHTEISEACSRLEISTS
QAKNRMYCDLQHVLGCIRSLPSDDLNNSETPNWGMLDEFVVQRFGGEDGQ
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggaactggggagatactcactagacctgaaaagaagccccagaaaatcattcacatca
tccccactctctaaatcaatctccgatgcttctacacaaagcctctccgccattctcaac
aaccccaccgacgccacgtggaccgcctggttctcgtcccccgccgtctccccgcccgat
tttctcgctgttaacacgacccgacccgggtccgaactcacccgacccgactttaagccc
tacgtttcttccatttgtgaacaattcaatagatttgaggatataaggaagcatggtagt
gaggaggatggtgtggaattggaccggagtggcggccagggggaggcgttggtggcgtgt
ttacgagaagtgcctgcattgtattttaaggaggattttgagttggaggatggggggact
tttcgtgccgcgtgcccgttttcgagtgtgggggagaatttggtgttgcaggagaagttg
tcgcagtatttggatgtggtggaggtgcatttagttaaggagattgcgttgcggtccaat
tcatttttcgaggcgcaggggcagttggaagggttgaattcgaggattgtggaagggtct
agtaggattagggaattgaaggagacaatttgggttttggattctgatttggttgatttg
gcgagacaggttcaggagcttagttcgaataaaagtaatatgttggtcttgcagcaaaag
ttgcggttgattatgaatgttaatcatgctctatctgctcttaaattgctggttgcatca
gcagattgtgctggagctttggacatcactgatgatttgcggcaattattggatggggac
gagctgactggtctgcactgttttcgtcaccttagggatcatgtaaatggtgcagtcaat
tcgataaacagcattctttcagcagaatttatgcgtacatccattcaagatactcgagat
gcagattctgtaatattattgcaagcaaaagaaagggcagcatcgcttacaaatggagat
gatgatgagataagcatagttgaaactgataaagtagaagactctaatattcgagaacag
ctacttcctcctattattggattgcttcgaactgcgaaactcccaagtgtattgagattt
taccgtgaaacacttactgctgagatgaaatctgcaatcaaggcggtggttgtagaactt
cttccagttcttctttgtagacaatcagacttggtttataatcaaggggaaagagttgcg
gatgcagatggcgggggctcatcactcgcaagtaagcttaaaaccttgtcatcagacaac
tttgttcagcttttgcggactttatttcggattgtatgggcacacttggtgcgggctgat
gaagtgaaaaaagtcattgaatgtattatgtgcaatctcgatggtcactatgctgctgac
tcagttgctgctgcaattgctgtcggtactgcaacttcagaagcatctcaagaaactgat
gctcaagtttctcccttcctctcctattctcttcacagaaatactgcaatgtctccttca
aaccaagggaggggaaatgatgcaaattatccattaaatatatcaagaaatttccgagcc
gatgttttgagagaaaacatggaagctgtctttgctgcttgtgatgtgggacatgcaaaa
tgggccaagatccttggtgttcgtgcagttcttcattccaagttgaggttgcaagagttt
ttaagtattcacaagctcactcaggattttattactgcaacggagatgattggtggaagg
tcggcttatagcattcgtggaacaatgcaatcacagaccaaagcctttgtggattttcat
cataattatcgaatggataaaataaaagcagtacttgaccaggagacgtgggtggaggca
gatgttcatgatgaattccaaagaatcgcggcttcactgtatattgaggagcctgttgat
gacggaaatgcggatgatacatataatagtcttgcaggaggcaaaaatgaatcagtctct
agcaatagtgtttctgtaatggcagacagccaagtagcagattctgttaagcccattgac
aggactgactctatcgaagtatctccagatatgacaacacaaataactctttcatcctca
actagaccaacagacagtaatagcagtgatgtaagattatcagcccaaagaaacggtgct
actcggacgatttcttttagaggtgttcactatcacatggtaaactgtggcttattcgtg
ctgaagatgctgtcagagtacattgatacaaataattctttgcctgcattgtcttctgaa
gttgtgctacgtgttgtcgagcttttaaaattctttaacacaaggacttgccaacttgtc
cttggtgctggagccatgcaggtatctggtttaaggtctattaattccaaacacttggct
ctagcgagtcaggttatcagctttacttatgccattatacctgaaatcaggaggattttg
ttctacaaagtgcctgagacacgacagccattactactgaaagagatagaccgtgtagag
catgattataagggtcatcgagatgagatacataagaagcttgtacaaataatgagagaa
aggttgttatatcatctccgtggtctgccacaaattgttgacagttggaacagaacggaa
gatactgatccacagccaagtaattttgctcggtccgttacaaaggaagttggctatctt
caacgtgtcctttcacgaactttgcatgatgcggatgttcaagccatatttcggcaagtg
gttgtaatcttccacactgaaatttctgaagcatgttctagattagagattagcacatct
caagccaaaaataggatgtactgtgatcttcagcacgttcttggatgcattagatcactg
ccttctgatgatctgaataattctgagactccaaactggggaatgcttgatgaatttgtt
gtacaaagatttggtggcgaagatggtcaatag
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