Daucus carota (carrot): 108204063
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Entry
108204063 CDS
T05350
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108204063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108204063
Membrane trafficking [BR:
dcr04131
]
Endosome - Golgi transport
Others
AP-4 complex
108204063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
HEAT_2
HEAT
INTS1_R4
Cnd1
HEAT_EZ
PDS5
TOR1L1_N
NPHI_C
Motif
Other DBs
NCBI-GeneID:
108204063
NCBI-ProteinID:
XP_017228843
UniProt:
A0AAF0WCR8
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All DBs
Position
1:complement(53958714..53968884)
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AA seq
967 aa
AA seq
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MGSQGGFGQSKEFLDLIKSIGEARSKAEEDRIVLHEIETLKRRIIEPDIPKRKMKEYIIR
LVYIEMLGHDAAFGYIHAVKMTHDDSLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNFLVVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAVMALHRFYQRSPSSV
SHLVSNFRKRLCDNDPGVMGATLCPLFDLVSVDVSSYKDLVVSFVSILKQVAERRLPKAY
DYHQMPAPFIQIKLLKILALLGNGDKQASGQMYTVVGDIMRKADTTSNIGNAILYECICC
VSSIFPNTKLLEAAADAISKFLKSDSHNLKYMGIDALGRLIKISPDIAEQHQLAVIDCLE
DPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMININDNHYKTDIASRCVELAEQFAPS
NHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDTADSQLRSSAVDSYLRIIGE
PKLPSAFLQVICWVLGEYGTADGKYSASYITGKLCDVAEAHSTDDTVKAYAVTALMKIYS
LEIAAGRQVDMLPECQSLIEDLCASSSTDLQQRAYELQAIIRLDAQALENILPLDASCED
IEVDKGLSFLNSYVQQSLENGAQPYIPESARSGVLNMSNLRSHDQQETSGHALRFEAYEL
PKPTMPTSRPATIMPSTELVPVPEPSYTREIHQTPAVPSISHSGSAELKLRLDGVQKKWG
KPTYSSPVQSTSNSDFQKTVNGAAQPDATGSTKQKARDVSHDIKKQEVEIPSEKQRLAAS
LFGGVSRSEKRQTAAGNRGAPKANSGATESPHMTKVATSSEPSTVKTAPVQPPPDLLDFG
ESTATSDAPSTDPFKQLEGLVDVTQDGSAANSGSVATKASDFMSLYSERPGNVPSNLIDP
SIDVNMSSGLLNASNNFDHGAGVVAQSPQSANKGPNLKDALQKDALVRQMGVTPTNQNPN
LFRDLLG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccaaggcggcttcggccaatccaaagagttcctcgacttgatcaaatcaatc
ggcgaggcgcgatccaaagccgaagaagatcgcatcgttctgcacgagatcgagacgctc
aaacgccgaattatcgagccggacattccgaaacgcaagatgaaagagtacatcattcga
ttagtttacatcgagatgttaggtcacgatgctgctttcggatacattcacgctgttaaa
atgactcacgatgactcgttgttgttgaaacggactggttatcttgcggtgacgttgttt
ttgaatgaggatcatgatttgataattttgattgtgaatacaattcagaaggatttgaag
tcggataattttttggttgtgtgtgcggcattgaatgcggtctgtaggttgattaatgag
gagacgattccagctgtgttgccacaggttgtggagttgttgggacatagtaaggaggcg
gtgaggaaaaaggcagttatggctttgcataggttttatcagcgctctccttcttcggtg
tcacatttggtgtcgaattttcgtaagaggctatgtgataatgatccaggggtgatgggt
gcgacactatgtcctcttttcgatcttgtttcagtagatgttagttcctacaaggattta
gttgtaagctttgtgagcattctcaagcaagtagctgagcgaagattgccgaaggcttat
gattatcaccagatgccagctccattcattcagatcaagttgctgaagatactagcactt
ctcggtaatggtgacaagcaggccagtggacagatgtatactgttgttggtgacataatg
aggaaggccgatactacaagcaatatagggaacgccattttatatgagtgcatctgctgt
gtttcatctatttttcctaatacaaagttattggaagctgcagccgatgcaatttccaag
tttctaaagagtgacagtcataatctgaagtatatgggtattgatgcccttggtagattg
ataaagataagtccagacattgctgagcagcaccaactggctgtaattgactgcttagag
gacccagatgacactttgaaacgaaaaacttttgaacttctgtataagatgacaaagtcc
tctaatgtggaagtcatcgtggatcgaatgattgagtatatgataaacatcaatgataat
cattacaaaaccgacatagcttccaggtgtgttgagcttgctgagcaatttgcaccaagc
aaccattggtttatccagaccatgaacaaagtcttcgagcatgctggtgatttagtaaac
attaaggtggcacataacttgatgcggttgattgctgaaggatttggagaagacgatgat
actgctgacagtcaactgagatcatctgctgtagactcctatttgcgcatcatcggagaa
ccaaaactcccatcagcatttctccaggtcatatgctgggtgttgggggaatatggaacc
gcagatggaaaatattctgcttcttatatcactggaaagctatgtgatgtggcagaggca
cattcaactgatgacactgtcaaggcatatgcggtaaccgcgcttatgaagatatactcc
cttgagatagctgctgggcgacaagttgacatgctgccagagtgccaatctttaatcgaa
gacttatgcgcatcgagctcaacggatttgcaacaacgtgcttatgagcttcaagcaatt
attcgcttggatgctcaagctcttgaaaatatattgccactggatgctagctgtgaagac
attgaggttgataaagggctttcattcctcaacagttatgtccagcagtctctggagaat
ggggctcagccctatattcctgaaagtgcacgttccggggttttaaatatgagcaacctt
agaagccatgaccaacaggaaacttcaggtcatgctcttaggtttgaggcttatgaactt
ccaaaacccaccatgcccacaagtagacctgctaccataatgccctcaactgagcttgtc
ccagtacccgagccatcttatacgagggaaatacaccagactccagcagtgccatctatt
tctcacagtggatcagcagaattaaagcttcgacttgatggggttcagaagaagtgggga
aagccaacatattcatctccagtgcaatcaacctcaaactctgattttcagaagactgtc
aacggagcagctcaacctgatgctacaggtagtacaaaacaaaaggcacgggatgtatcc
catgatataaaaaaacaggaagttgaaataccctcagaaaagcaaagactcgctgcttct
ttgttcggtggtgtttctaggtctgagaagagacaaactgctgctggcaacaggggggct
ccgaaggcaaacagcggtgcaacagaaagtcctcacatgaccaaggtagctacttcatct
gaacccagtacagtgaagaccgctcctgtccaacctcctccagacttgttggactttgga
gaatcaactgcaacaagtgatgccccttccacggatccgttcaagcagttggaaggttta
gttgatgtaacacaagatggatcagctgcgaattctggttcagttgctactaaagcatct
gattttatgtcgctttacagtgagaggcctggcaatgtgccaagtaatctgatcgatcct
agtattgatgttaatatgagttcaggtctattaaatgcaagcaacaattttgaccatggt
gcaggcgtggtggcacagtcgcctcaatcagcaaataaaggtccaaatcttaaagatgct
ttacaaaaggatgctctagtgaggcaaatgggtgtgacccctacaaatcagaatcccaac
ttattcagagacttgcttggctga
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