Daucus carota (carrot): 108204177
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Entry
108204177 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108204177 isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108204177
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
90S particles
Other 90S particles
108204177
Pre-60S particles
Other pre-60S particles
108204177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_N
Hemerythrin
HEAT_Maestro
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
108204177
NCBI-ProteinID:
XP_063941859
LinkDB
All DBs
Position
1:complement(47727164..47739382)
Genome browser
AA seq
1268 aa
AA seq
DB search
MESPPLIADTDNFCSQIFSKYGSSTAEHHQHLIAVTGAMSQTLKDNNQPLSLIAYFGAAC
SSLDSISSESEPSGHALDSLLTILSLILPGLSGAVVKKKFELVAELVVRVLRGKEVSEAG
VAAGLKCVACLVMVRGSVSWNDVSQLYGILLSYATDSRSKVRRQSHVCLRDVLQSFQGTA
ILAPASEAIANIFERFLLLAGGSNASSSEGPTGAQEVLYILEALKDCLPLLSLKSSTNIL
KYYKSLLELHQPLVTRRITDSLNVLCRHQKGEVSAEVLLDLLVSLAVLISTNETSADSMT
VTARLLDAGMKKVFLINRQICVVKLPVVFSALADVMASEHEEPLYVAIEAFKSLICSCID
DTLIKQGVNQINESAKIGSRKSAPTIIEKVCATIESLLDYRYAAVWDTSLQVVSAMFDKL
GDSSSYLLRRTLTNLADMQKLPDEDFPFRKQLHECVGSALVAMGPETFLSLLPLKLEAQD
VSQVNAWLFPILKQYTVGSSLNFFTESIFDMISLMKKKSAVLEQEGKIREARTVDGLTYS
LWSLLPSFCNYPLDTAESFKDLEKALCGSLRDEPDIRGVICSSLLILIQQNKKILEGNDD
ISGTETNNPRERALASYTPEVAAKNLNALRLSAREILSVLSGIFLKTSKDDGGLLQATIG
EFASISDKVVVSRFYTATMRKLLKVTEEAGKAQNSKSSNSMEVDSSSSEVSLSVARAQLF
DLAVSLLPGLDPKETDLLFVALEPALKDSDGMIQKKAYKVLSVILKSSDGFISRKLEELL
NMMIEVLPCHFAAKRHRLDCLYYLIEHVSKDNLEDRRHAVIASFLTEIMLALKEANKKTR
NRAYDIIVQIGHACGDENRGGKKENLRQYFYLVAGGLASETPHSISAAVKGLARLAYEFT
DLVSSAYNVLPSALLLLQRKNREIIKANLGLLKVLVAKSHAEGLHANLKTVVEGLLNWQD
STKNHFKAKVKLLLEMLVKKCGLDAVRAVMPEEHMKLLTNIRKMKERKERKLAANLEETR
SQFSKATTSRASKWNHTKIFSDFGDEDDDSDNEYMGADSVSGRQTKNVSVLNSKASTLRS
KRKRKAAKLLPEDSYDQIDDEPLDLLDRLKTRSALRSSEQKKAESDDELEMDAEGRLIIH
EEGQKPKREMPSEPDLESGSQAGSHVSVNSKKAQKRRKTSESGWANTGSEYASKKAAGDV
KRKNKLEPYAYWPLDRKMVSRRPEQRAAARKGMSSVVKLTKKFEGKSVSNALSVKIKRGK
KKANKKNR
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgccgccgttgatcgctgacaccgacaatttctgctcccaaatcttttccaaa
tatggctcctccactgccgagcaccaccagcacctaatcgccgtcaccggcgcgatgtcc
caaactctcaaagacaacaaccagcccctctctctcatcgcgtacttcggcgccgcctgc
tcgtctctcgacagcatctcgtccgagtcggagccgtcgggtcacgcgctcgactcgctc
ctcacgattttgtcgctgattctgccgggattgtcgggcgctgttgtgaagaagaagttt
gagcttgtggcggagctggtggttagggttttgagaggaaaggaggtgagtgaggcaggg
gttgccgccgggttgaagtgtgtggcgtgtttggtgatggttagagggagtgtaagttgg
aatgatgtgtcacagctttacggaattttgcttagttacgccacagatagtcggagtaag
gtaagaaggcaatcacatgtatgcctccgtgatgtcctgcaaagttttcagggtactgcc
attcttgctcctgctagtgaagctatagcaaacattttcgaaaggtttcttttgctcgcc
ggaggatccaatgcgagttcttccgaaggacctacaggtgcccaggaggtcttatacatt
ttggaagctctcaaagattgtcttcctctattgtctttgaagtcctcaaccaatatcctg
aagtactataaatccctactggaactacatcagccccttgttactaggcgcataactgac
agcctaaatgtgctttgtcgtcaccagaaaggagaagtttcagctgaagtgctgcttgat
ctgttggtttccttagctgtcttgatctctaccaatgagacatctgcggatagcatgaca
gtcactgctcgtttactagacgcagggatgaaaaaagtctttttgataaacaggcaaatt
tgtgtagttaagctcccggtggtgtttagtgctctcgcagatgttatggcttctgaacat
gaagaaccgttgtatgttgccatagaggcatttaagagcttaatatgttcatgcatagat
gacaccttgataaaacaaggtgttaatcagatcaatgaaagtgcaaagataggatcacgg
aagtctgctccgactatcattgagaaagtgtgcgcgactattgagagtttactcgactat
cgatatgctgcagtctgggacacgtctttacaagttgtttcagcaatgtttgacaagtta
ggtgacagttcttcatacctattgaggagaacactgacaaacctggctgacatgcagaag
ttgcccgatgaagacttcccgttcaggaaacagttgcatgaatgtgtaggatctgctctg
gttgcaatgggtcctgaaacatttttaagccttctgcctcttaagttggaggcccaggac
gtgtctcaggtcaatgcctggctttttccaattttgaagcaatatactgttggttcaagt
ttaaacttctttacggagtcgatcttcgatatgattagcctgatgaagaagaagtctgct
gtgcttgaacaagaaggaaagattcgtgaagctaggactgttgatggactgacttactct
ttgtggtcactgctgccatcattctgcaactatcctctggatactgctgaaagtttcaag
gatttagagaaagcattatgcggctccctacgtgatgaaccggatattcgtggtgtaata
tgttctagtttgctgattcttattcagcaaaataagaagatactggaagggaatgacgat
atatctggtactgaaacgaacaatccaagggagcgagcacttgccagctatactccagag
gttgcagctaagaatttaaatgcattgcgattatctgctcgtgagattttgtccgtcttg
tcagggatctttttaaagacttccaaagatgatggtggacttcttcaggctaccattggt
gaattcgcttcaatatcagataaagtcgtggtctctagattttatacggctacaatgagg
aagctattgaaggtgactgaagaggctggcaaagcacaaaattctaaaagttcgaactct
atggaggttgatagctcatcgtccgaagtttctctgtcagtggcaagggcacaattattt
gacttggcagtttcccttttgcctggcttggaccccaaagagacagatcttctgtttgtt
gcattagagcctgcgttgaaggatagtgatgggatgattcagaagaaagcatacaaagtt
ctttctgttattctcaagtcttctgatggatttatttcaagaaagcttgaggagttgctt
aatatgatgatagaagtgctgccttgccattttgcagcaaaacgtcatagacttgactgt
ttgtactacttaattgagcatgtgtccaaggataatttggaagatagaaggcatgctgta
attgcttcctttttgacggaaatcatgcttgctttgaaagaggctaataagaaaacaagg
aacagggcatatgatattattgtgcaaattgggcatgcctgtggggatgaaaataggggc
ggcaagaaggaaaatttgcggcaatatttttacttggtggctggaggactggctagtgag
accccacattctatcagtgctgcagtaaaaggcttagctcgcttggcctatgagttcact
gatttagtttctagtgcttataatgttcttccgtcggcgctgctcctcctccagaggaaa
aatagagaaataattaaagctaatctaggtttattgaaagttctggtagctaaatcacat
gctgagggtttgcatgcaaatctaaagactgtagttgaaggtttactgaactggcaagat
agtacgaagaaccatttcaaagctaaggttaaactactacttgagatgcttgtaaagaaa
tgtggtcttgatgccgttagagcagtaatgcctgaagagcacatgaaacttcttaccaat
ataagaaagatgaaggagaggaaggagaggaaacttgctgctaatctagaagagaccaga
tctcaattttcaaaagcaactacttcacgagcaagcaaatggaatcatacaaaaatattt
tctgattttggcgacgaagatgacgacagtgataatgaatacatgggtgccgattcagtg
tctggtcgacagacaaaaaatgtgtcagtgttaaactctaaagcatccacattaaggtcc
aagagaaagcggaaagcagctaaacttttgccggaagattcatatgatcaaatagatgat
gagcctcttgacctgcttgatcggctgaagacaaggtcagctcttcgatcaagtgaacag
aagaaggcagagtctgatgatgagctagagatggatgcagaaggtcgactgataatccac
gaggagggacagaaaccaaaaagagagatgccatctgaacctgacttagagtcaggaagt
caagcaggtagccatgtgtctgtgaactccaaaaaagctcagaagcgtaggaaaacctca
gagtctgggtgggccaacacaggttcggagtatgccagcaaaaaggctgccggtgatgtg
aagagaaagaataagcttgaaccttatgcttattggccacttgatagaaagatggtgagt
cgtaggcctgagcagcgggcagctgcacgaaaaggtatgtcaagtgtggtaaagctgacc
aagaaattcgaaggtaagagcgtctcaaatgcactgtcagttaagatcaagagaggtaag
aagaaagcaaacaagaaaaacagataa
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