Daucus carota (carrot): 108204187
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Entry
108204187 CDS
T05350
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108204187
Peptidases and inhibitors [BR:
dcr01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
108204187
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GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_5
TIP49
AAA_16
RuvB_N
AAA_22
nSTAND3
AAA_25
ORC-CDC6-like
AAA_14
AAA_28
AAA_17
AAA_2
Parvo_NS1
Mg_chelatase
IstB_IS21
AAA_33
AAA_7
NACHT
AAA_18
bpMoxR
Zeta_toxin
TsaE
ABC_tran
Peptidase_M50B
Motif
Other DBs
NCBI-GeneID:
108204187
NCBI-ProteinID:
XP_017228997
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All DBs
Position
1:complement(41583690..41590993)
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AA seq
719 aa
AA seq
DB search
MAVRRLLTEFAKKQQEIKHLSKLSSRSYLTSQTFQGGRVSSLPGGPRRFQSSYIGRLARR
VRDTDGSGDASYLRELSRRNDPEGVIRLFESQPSLHNNQSALAEYVKALVKVDRLDESEL
MKMLQRGTSGSGTVGEESIGGLAAFGNAGKITKDGVLGTPSAPIHMVANEGGSFKQQLWR
TVRTLGLAFLLISGVGALIEDRGITKGLGLHEEVQPSMDSKTKFDDVKGVDEAKAELEEI
VHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVG
VGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEG
VIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMESHMTKVLKGDDVDLMIIA
RGTPGFSGADLANLVNVAALKAAMDGSKAVSMADLEYAKDKILMGSERKSAVISDESRKL
TAFHEGGHALVAIYTDGALPVHKATIVPRGTSLGMVSQLPDKDETSMSRKQMLARLNVCM
GGRVAEELIFGENEVTSGASSDLKQATNLARAMVTKFGMSKQVGVVTHNYDDNGKSMSTE
TRLLIEEEVRELLETAYNNAKTILTTHEKELHALANALLERETLSGNQIKALLAQLNSDQ
QQQQKIVAPQNNSKSTSIPPSGPSAADSAAAAASAAASAAAAAATAAANAAKGKGVAPA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccgccgacttctcaccgagtttgcaaagaagcagcaagagatcaagcactta
agcaagctgtcttctaggtcttatctcacttcacagacatttcaaggtggcagagtgagt
agcctgcctggtggtcctcgtcgctttcaatcaagttatattggacggttagctcggaga
gtacgtgatacagatggatcaggtgatgcatcctatcttagggaactttctcgacgaaat
gatccggagggggtgataagattgtttgaaagtcaaccctcattgcataataaccaatca
gcacttgccgaatatgtcaaggcgttagttaaagttgataggctggatgagagtgagttg
atgaagatgttacaaagaggaacttcgggttctggtacagtgggggaagaaagtattggc
ggccttgcagcttttggaaatgctggaaaaataacaaaagacggtgttctaggaacaccc
tctgctccaatacatatggtggctaatgaggggggcagctttaaacaacagttgtggcgt
actgtgcgaacactaggattggcctttctcttgatttcaggtgtcggggcactaattgag
gatagaggaattactaaagggctgggtctccatgaagaggtgcaacctagcatggattct
aagacaaaattcgatgatgtaaagggtgttgatgaagcaaaagctgagctagaagagatc
gttcactatcttcgagaccctaagaggtttactcgtcttggtgggaagctacccaaagga
gttttgctcgttggtcctcctggcactggcaaaactatgttggcaagggcaatagcagga
gaagctggggtgccttttttctcatgtagtggcagtgagtttgaagagatgtttgttggt
gttggagcccgacgagtgagagatctattttcagctgcaaagaagcggtccccatgcatt
attttcattgacgagatagatgccataggaggtagccgcaacccaaaagaccagcaatac
atgaagatgacattgaaccaattgcttgttgaactggatggtttcaaacaaaatgaaggg
gttatagtaattgctgccactaacttccctgaatctttagacaaggcactggtaagacct
ggacgatttgatcgtcacattgttgttcctaatccagatgttgaaggccgcaggcaaatc
atggaatctcatatgacgaaggttttgaagggagatgatgttgatctgatgataattgcc
agaggtactcctggattttctggtgcagatctggcaaatttggtcaatgttgcagctctg
aaggctgccatggatggttccaaagcagtgtccatggctgatctagaatatgccaaggac
aagatcttgatgggcagtgagcgcaagtcagctgttatatcagatgaatcaagaaagctg
acagcttttcatgagggtggccacgcgttggttgcgatctatactgatggggctcttcca
gtacacaaggcaactatagttccacgaggtacatcacttggtatggtttctcaattacca
gataaggatgaaactagtatgtcccgtaagcagatgcttgcccgtcttaatgtttgcatg
ggcgggcgagttgctgaagagctcatatttggtgaaaatgaggtcacatcaggtgcttct
tctgaccttaaacaagcaaccaaccttgctagagccatggttacaaagtttggaatgagc
aaacaagtaggggtggttactcacaattatgatgacaatggaaaaagcatgagcactgag
actagactcctcattgaggaagaagtcagagaactattggagactgcatataataatgca
aaaaccattctcacaactcacgagaaggagctccatgcacttgctaatgccttactagag
cgcgagacgcttagtggaaatcagatcaaggccctgcttgcgcagttaaattctgaccag
caacagcaacagaagatagttgcacctcagaacaattcaaagtccacatcaattccccca
tctgggccctctgctgcagattctgcagccgccgcagcttccgcagcagcttcagcggct
gctgcagccgccactgctgcagccaatgcagccaagggaaaaggagttgctcctgcttag
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