Daucus carota (carrot): 108204226
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Entry
108204226 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108204226
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108204226
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
108204226
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108204226
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Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
108204226
NCBI-ProteinID:
XP_017229044
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All DBs
Position
1:44709878..44723007
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AA seq
867 aa
AA seq
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MLSSLSLFPQTSSKTALSGGVSIEREMGGRGRRSRTQRKHFKDGRENVWKRPRSDAQQQE
DFNAKKHWEPFATQNPAFDDYYKEQGIVSLEEWDTFNKFLRRPLPAAFRINSSSQFCDDI
RSQLENDFMKSLQAEDTDGNEVAAIKPLSWYPENLAWQSNFSRMQLRKNQILERFHEFLK
LENEIGNITRQEAVSMVPPLFLDVRPDHFVLDMCAAPGSKTFQLLEMIYRSVEPGTLPSG
MVIANDVDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPSCRLKKNNTAKSETGGVKELAI
DQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGMGNSLHCLQVQIAMRGLSLLKVGGKMV
YSTCSMNPVENEAVVAEILRKCGGSVELLDVSAELPNLIRRPGLKKWKVRDKGSWLASYE
DVRKFRRQGIVPSMFPSGKHYNEESANDQEADLEVIPENGGESINGSYLMEDKTSSDNNC
EEEISDLPLEYCMRIVPHDQDSGAFFIAVFQKLSPLPAIQNHAAIQKKTITPPELLTSND
RSEKSEDLGTEEDLMEIALTDVKEQSTEPFQDSDIADEQTAASTDTEANNISEETEPEDI
PAPVSQETVPEVARGKRKLQLQGKWRGVDPVVFLNSDAIINGIKTFYGIKESFPFSGYLV
TRNSDTNHVKRIYYVSDSVKDVLKLNFLGGEQLKITSIGLKMFERQTSKEGNNAAMFRIS
SEGLPLLLPHITKQVISAKEIDFNHLLQYKTIKFADFVDAEFGEKASKLLLGCCVVVLNK
GCEIVHDPPHVNASTIAIGCWRGRTNVAVMVTAIDCQELLERLVPKTDKVNGSTPDGCKP
PIADDAVTKVNGVDSEDIVTHTPDISG
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgctttcttcactctctctctttccccaaacgagcagcaaaacagcactaagcggcggc
gtctccatagagagagagatgggagggagaggaaggaggtcacgcacacagagaaagcac
ttcaaagacggcagagagaacgtctggaaacgccccaggtcagatgcgcaacagcaagaa
gacttcaatgctaaaaaacactgggagccttttgctactcaaaaccctgcttttgatgat
tactacaaggagcaaggaattgtgtctctagaagagtgggatactttcaataagtttcta
cgcagaccgcttcctgctgcttttcgaatcaattccagtagccaattttgtgatgacatc
cggtcacaattagagaatgacttcatgaaatctctccaggctgaggatactgatgggaac
gaagttgctgcaattaaaccactgtcttggtacccagagaatcttgcttggcagtcaaat
ttttctcggatgcagttgaggaaaaaccaaattcttgagaggttccatgagttcttgaag
ttagaaaatgaaattggaaatattacaagacaagaggctgtgagcatggtaccaccactg
ttcttggatgtacggccagatcattttgttcttgacatgtgtgcagctccaggttcaaag
acatttcaattgctagagatgatatatcgatcagttgaacctggaacattgcctagtgga
atggtgatagctaatgatgttgacgtccaaagatgtaatcttctcatccatcaaactaag
agaatgtgtacagctaacttgattgtcacaaatcatgaagctcaacatttccctagctgt
cgtttgaaaaaaaataacactgccaagtcagagacaggaggtgtaaaggagcttgctatt
gatcaacttttatttgatcgtgtcctttgtgatgttccctgcagcggtgacggtacgctc
cggaaagctcctgatatctggcggaaatggaatgtgggaatgggaaattctctacactgt
ctgcaagttcaaatagcaatgcgagggttatctttgcttaaagttggtgggaaaatggtt
tactcaacttgctcaatgaatccagttgaaaatgaggctgtagttgctgagatattacga
aaatgtggaggtagtgttgaacttcttgatgtgtcagctgagcttcccaatctcattcgc
aggccaggtcttaagaaatggaaggttcgtgataaaggaagttggttagcatcatacgaa
gacgttcgcaaatttcgtagacagggaattgttcccagcatgtttccttctgggaaacac
tataatgaggaatctgctaatgaccaagaggcagatctggaagtaatacctgagaatggt
ggagagtctataaatgggtcctacttgatggaggataagacttcctctgacaataattgt
gaggaagaaatttctgatcttcctttggaatattgtatgcggatagtgcctcatgaccag
gatagtggtgctttctttatagctgtctttcagaaactttctcctttgcctgctattcag
aatcatgcagccattcagaaaaagaccatcacaccacctgaactactaacttcgaatgac
agatccgagaaatctgaggatttgggcacagaggaagacctaatggagattgctttaaca
gatgtaaaagaacaatctacagaaccatttcaggattccgatatagcggatgaacaaaca
gctgcttcgacggatactgaagcaaataatatatctgaagaaactgaacccgaggatatc
ccagctcctgtcagtcaggaaactgttccagaggttgcaagagggaagagaaagctgcag
cttcaaggaaagtggagaggcgttgatccagttgtttttttaaatagcgatgccattata
aatggaataaaaacattttatggcatcaaagaatcgtttccatttagtggttaccttgtt
acaagaaatagtgatactaatcatgtgaagagaatttactatgtatcagactctgtgaag
gatgtgctgaagcttaacttccttggaggggagcaactgaagataacttccattggccta
aagatgtttgaaagacagacatcaaaggaagggaataatgctgccatgttccgtatatca
tctgaagggctgcctctacttcttccacatataacaaaacaagttatatctgcaaaagaa
atcgactttaaccatcttctgcagtataaaaccattaagtttgcagattttgttgatgct
gaattcggcgaaaaggcatcaaaacttctgttgggttgctgtgtggtggttttgaataaa
ggctgcgaaattgttcatgatcccccgcatgttaatgcttctacaattgctattggttgc
tggagaggtaggactaatgttgctgtaatggtaaccgctatagactgccaagaacttctt
gaaagactagtaccgaaaacagataaagtaaacggctctacaccagatggttgcaagcct
cccattgctgatgatgctgtaacaaaagtgaacggcgttgacagtgaggacattgttaca
catacaccagatattagcggttga
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