Daucus carota (carrot): 108204375
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Entry
108204375 CDS
T05350
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108204375
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108204375
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108204375
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108204375
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108204375
Ion channels [BR:
dcr04040
]
Chloride channels
Chloride channel (CLC)
108204375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TAT_signal
Motif
Other DBs
NCBI-GeneID:
108204375
NCBI-ProteinID:
XP_017229262
UniProt:
A0A166GKL3
LinkDB
All DBs
Position
1:25755865..25760669
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AA seq
784 aa
AA seq
DB search
MEERDSDQDNKHNDDDHDDYEAVDIERLVRKEGRSNASSFLEREPLLRSRKNNTSQIAIV
GANVYPIESLDYEIVENDLFKQDWRSRKKIQIFQYVVLKWTLACLIGLSTGLVAFFNNLA
VENIAGFKLLMTSNLMLENRYIMAFVTFAGWNVALATCAAVLCAYIAPAAAGSGIPEVKA
YLNGVDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSRKYHL
TWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTT
AVVAVVLRSLMVFCQSGKCGLFGQGGLIMFDINSAVASYTAPDLVAVILLGIIGGIFGSL
YNYLVDKVLRIYSIINERGPAYKVLLVISISLLTSCCAYGLPWFTGCVPCPAGLEEQCPT
VGRSGNYKNFQCQPGHYNDLASLFLNTNDDAIRNLFSSRDAHEFHLSSLSLFFGAMFCLG
IITYGIAIPSGLFIPVILAGASYGRVVGSILGSISDLDIGLFALLGAASFLGGTMRMTVS
LCVILLELTNNLLMLPLVMLVLLISKTVADSFNKGVYDQIVKMKGLPYLEAHAEPYMRQL
VAGDVVSGPLITFSGVEKVGNILHYLETTGHHGFPVIDEPPFTAAPELCGLVLRSHLLVL
LKGKRFTKQKVLSGSDLLRRFHAYDFAKAGSGKGLKLEDLDIKQEEMDMYVDLHPITNTS
PYTVIETMSLAKAAVLFREVGLRHLCVVPKTPGRPPIVGILTRHDFMAEHILGLYPDMKP
QKHV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagagatagtgatcaggataacaagcataatgatgatgatcatgatgattac
gaagctgttgacattgagagattagtgagaaaggaggggagaagcaatgcgtcgtcgttt
ttggagagagagccgctgttgcggagcagaaagaacaatacttcgcagattgctattgtt
ggtgctaatgtttatcctattgagagccttgattacgagatcgttgaaaatgatttattt
aagcaggattggaggtcgagaaaaaagattcagatatttcagtatgttgtgctgaaatgg
acacttgcatgtctcataggattaagtacagggcttgtggctttctttaataatcttgca
gtggaaaacatagcggggtttaagcttctaatgactagcaatctaatgcttgaaaacaga
tatattatggcctttgtaacatttgcgggttggaatgttgctctagcaacttgtgctgca
gtcctctgtgcttacattgccccagcagcagctgggtctggcatacctgaagtcaaggca
tatcttaatggtgtcgatgcgcattccattttagctccaagtaccctctttgtgaagatt
tttggttcaatctttggggttgccgctggatttgttgtgggtaaggaaggacccatggta
cacacgggggcttgcatagccaacttacttggacagggtggttcccgcaaataccatttg
acatggaaatggcttagatacttcaaaaatgacagagatcgcagggatttaatcacctgt
ggagcagcagctggcgtggcagctgcatttcgtgccccagttggtggagttctctttgct
cttgaagaagcagcctcatggtggcggagtgctcttctttggagaactttcttcactact
gctgttgtagctgtggtgctgagatctctaatggtcttctgccagagtggaaaatgtggg
ctattcgggcaggggggtcttataatgtttgatatcaattctgctgtcgcttcttacact
gctccagatttagttgcagtaatactacttggaatcattggtggaatttttggaagtctt
tacaactatcttgtcgacaaggtccttcgtatctatagcatcattaatgagagaggtcca
gcatataaggtcttgctcgtcatctccatttctcttttgacatcttgttgtgcatatggt
ctcccttggttcacagggtgtgttccctgtcctgcaggcctggaagaacaatgcccgaca
gttggtcgttctggaaactataaaaatttccaatgtcaaccaggccactataatgacctt
gcctcccttttccttaataccaatgatgatgcaatccgcaacttatttagctctcgtgac
gcacatgagttccacctctcttccctctctttattctttggagctatgttctgccttggt
attatcacatatggcatagctataccttctgggctcttcatacctgtcatactcgctgga
gcctcgtacgggagagttgtcgggtccatcctcggctctatatctgaccttgatattggt
ctctttgccttgcttggtgctgcctcctttcttggtggcacaatgagaatgactgtatca
ctttgtgtcatacttctggagctcactaataatctactgatgcttccgctagtaatgctt
gttcttctcatctcaaaaactgtcgctgatagtttcaacaaaggcgtctacgatcaaatt
gtgaagatgaagggtttgccttatctggaagcccatgctgaaccctacatgaggcaattg
gttgcaggggatgttgtttcaggccctttaataacgttttctggtgttgagaaagtgggg
aatatactacattatctagagacgaccggacatcatggattcccagtcattgatgaacct
cctttcacagctgccccagaattgtgtggtctcgttttaaggtcacacctgcttgttttg
cttaaaggaaagagatttacgaaacagaaggtattgagtggatcagatttgttaagacga
tttcatgcatatgattttgcaaaggctgggtcaggaaaggggcttaagctggaagatttg
gatataaaacaagaagaaatggatatgtatgtcgatcttcatcctattacaaatacgtca
ccatacacagtgatagagaccatgtctcttgccaaagctgcagtcctcttccgggaggtt
ggccttaggcatctatgtgttgtaccaaagacaccggggaggccacctatagttggtatc
ctgactcgacacgactttatggcagagcacatcttgggactgtacccagatatgaaaccc
cagaagcatgtctag
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