Daucus carota (carrot): 108204390
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Entry
108204390 CDS
T05350
Name
(RefSeq) protein transport protein SEC24 B isoform X1
KO
K14007
protein transport protein SEC24
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108204390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108204390
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108204390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
108204390
NCBI-ProteinID:
XP_017229280
UniProt:
A0AAF0W4H4
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All DBs
Position
1:complement(32694732..32711929)
Genome browser
AA seq
1032 aa
AA seq
DB search
MSFQVNNNNRPPFPPPFAQQGPPGPQQGPPGPRPGPPPPGVVPRTPIGPPQGALGPPNAP
PGRPSGPTPPFGVRPPGPPPPGAFSSAGPAPPPPGTRPGPFQSAPMNSGQVPPPSTGAPG
PFSNGPPSGGVQGGPRFPSPVGMQRPVSGPPSLPSGPPSLPSMPPSAGMRPFSGGLAASP
LPGPAPLAPSFASHSQGVPPPPLGSSAFSAPAQGPQFQVSPFGSQPWSMQQRQVAPPSAI
PGAAPPPRMYNMPGPESAASISPAMSQGPSKIDPNQIPRPIPSSSVVLHETRQGNQANPP
PSATTDYIVRDTGNCSPRYMRCTINQIPCTNDLLGTSGMQLALLVQPLALPHPSEEPIQV
VDFGESGPVRCSRCKGYINPFMRFIDQGRRFICNLCGYTDETPREYHCNLGPDGRRRDAD
ERPELCKGTVEFVATKEYMVRDPMPAVFFFLVDVSMNSLQTGATAAACSAISQVIADLPE
GPRTMVGIATFDSTIHFYNLKRALQQPLMLIVPDIQDVYTPLQSDVIVQLSECRQHLELL
LENIPTMFQNNKTADSAFGAAVKGAFLAMKSTGGKLMVFQSVLPSVGIGALSAREAEGRT
NITAAEKEAHKLLQPADKILKTMAIEFAEYQVCVDVFITTQTYIDIASISVIPRTTGGQV
YYYYPFSAVSDPAKLYNDLRWNITRPQGFEAVMRVRSSQGLQVQEYSGNFCKRIPTDVDL
PAIDCDKTIMVTLKHDEKLQDGAECSFQCALLYTTVDGQRRIRVSTLSLPCTTILSNLFR
SADLDTQFACFLKHAAIEIPSSPLLQIREQMTTLCINILHSYRKFCATVSSAGQLILPEA
LKLLPLYTLALIKGTGLRTDGRIDDRSYWINYVSSLSTPLAIPLVYPRMISIHDIDLKET
EGILPPAIPLSSEHVTDDGIYLLETGEDCLIYIGNSVDHDVLRQILGISSVEEIPTQFVL
QQHDNPLSKKLNEVINEIRRQRCSYLRLKLCKKGEPSGMQFFSYMVEDKAPSGLSYVEFL
VHIHRQIQAKMS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcaggttaataataataacaggcctccatttcctccgccttttgctcagcaa
ggtccacctgggccacagcaaggtccccctgggccacgaccagggccgccgccaccaggt
gttgttcctaggactcctattggcccaccgcaaggtgcattaggaccccctaatgcaccg
cccggtaggcctagtggtcctactccgccttttggagtgaggcctccgggccctccaccg
ccaggtgcattcagttctgccggccctgcacctccacctcctggtactcgccccggtccc
tttcagtctgcaccaatgaattcaggtcaagttccgccaccatctactggtgccccaggt
ccatttagtaatggaccaccttcagggggtgtacaaggtggacctcgctttccttctcct
gtgggaatgcagcggccagtaagtgggccaccttctctgccaagtggaccaccttctcta
ccatcaatgccgccctctgcaggaatgcgcccttttagtggaggtctagctgctagtccc
ttacctggtcctgcaccactggcaccatctttcgcatcacattctcaaggcgtgccacca
ccccctttaggctcctcagcattttcagctcctgctcaaggacctcaatttcaggtttct
ccgtttgggtctcagccgtggtccatgcaacaacgtcaggttgcaccaccttcagcaatt
cctggtgctgctccacccccaaggatgtacaacatgccaggtccagaatctgcagcctcc
atatcacctgccatgagccaaggcccgtcaaaaattgatcctaatcagatcccgcgccct
attccgagttcatcggttgtgttgcatgaaacacgtcagggcaatcaagctaacccgcct
ccgtcggctaccactgactatattgtcagggacaccggaaactgcagtccccggtacatg
agatgtacaatcaaccagattccttgcaccaatgatcttctaggaacatccgggatgcag
ttggcactgttggtccagcccttggcccttcctcatccctctgaggagcctatccaggtc
gtggattttggtgaaagtggtcctgtccggtgttctcgttgcaaaggctacataaatcct
ttcatgaggttcattgaccagggaagacgtttcatttgcaacttatgtggatatactgat
gaaaccccccgagagtatcattgcaatctaggcccggatggtaggcgcagagatgccgat
gaaaggcctgagctgtgtaaaggaacagtagaatttgttgccaccaaagaatatatggtg
cgcgatccaatgcctgcagtatttttctttctcgttgatgtgtcaatgaactcactacag
actggtgcaacagcagctgcatgtagtgcaatcagccaagttattgctgatctgccagag
ggccctcggacgatggtggggatcgcgacgtttgattcgactattcatttttacaatttg
aaacgtgcattacagcagccactgatgcttattgttcctgacattcaagatgtttacact
cctctccagagtgatgtgattgttcaactttctgagtgtcgtcagcatttggagcttttg
ctggaaaatatccccaccatgtttcaaaataataaaactgctgattcggcttttggtgca
gctgtcaagggtgctttcttggcaatgaagagtaccggtggcaaacttatggtatttcag
tcagttttaccatctgttggcattggtgccctttctgctagagaagctgaaggaagaact
aatataacagctgctgagaaggaggctcacaagttgctccaaccggctgacaaaatattg
aagacaatggctattgaatttgccgagtatcaggtctgcgttgatgtgttcataaccaca
caaacatatattgacattgcatcaatctctgtgattccaaggactactggggggcaggta
tattattattaccctttctctgcggtttctgaccctgccaagctttacaatgatcttcga
tggaacattaccaggcctcaaggttttgaggcggttatgcgagttagatccagccagggc
cttcaagttcaagaatattctggaaatttttgtaaacgcattccaacagatgtggatctg
ccagcgattgattgtgacaagacaataatggtgacactaaaacatgatgagaaattgcag
gatggtgcagaatgttcttttcagtgcgctcttctgtacaccacagttgacggtcaaaga
agaatacgagtttctactttgtcgcttccatgcactaccatactcagtaatctgttccgt
tcagccgacttagatactcagtttgcctgtttcttaaagcacgctgcaattgaaattcct
tccagtccgctactgcaaatcagagagcagatgacaacactctgcatcaacattcttcat
tcatatcgtaaattttgcgccacagtatcatctgctggacagcttattctcccagaggct
cttaaattgttgcctctttacacacttgctttgattaaaggtactggattgagaactgat
ggacgcatagatgatcggtcatattggatcaattatgtttcttctctttctactcccttg
gcaataccgttggtgtaccctaggatgattagtatccatgacattgacttgaaggaaacg
gagggtattcttcctcccgctattccactttccagtgagcacgtgactgatgatggaata
tatcttctagagactggcgaggattgtttaatatatattgggaactcagtcgatcatgat
gttttgcggcaaattcttggcatttcttctgttgaagaaattcccactcagtttgtttta
cagcaacatgataatccgttgtcaaaaaagcttaatgaagttatcaatgaaataaggcgc
cagagatgttcctacctccgtctaaagttgtgcaagaaaggggaaccatcaggaatgcaa
ttcttctcatatatggtggaggacaaggccccaagtggtctctcctacgttgagttcttg
gtacatattcatcggcaaattcaagctaaaatgagctga
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