Daucus carota (carrot): 108204428
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Entry
108204428 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108204428
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108204428
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108204428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
108204428
NCBI-ProteinID:
XP_017229343
UniProt:
A0AAF0W696
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All DBs
Position
1:complement(24602582..24608970)
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AA seq
827 aa
AA seq
DB search
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVA
VERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGS
PNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFRSQDYTAVLYCLRQLFEKVE
VDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHR
DGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCD
DLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEME
EMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVA
VEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVAR
KEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQ
EEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRPVKKPPSPEKGTKKTTQQTQASKTK
DDFEIVPAPETDSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHD
DGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLE
KVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDR
RMKKDARAVKAASKKGKGKGKNSKDNKGKKPGKEFSAKGGKAGNKRR
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagtgaaaggaaagcacaggttagacaaatactaccacctcgccaaagaacac
ggctaccgttcccgtgccgcctggaagctcgttcagcttgacgccaaattcaccttcctc
cgctcttctcgctccgtcctcgatctctgcgccgcccccggtggatggatgcaagtcgcc
gtcgagcgtgtccccgtcggcagtctcgtcatcggcgtcgaccttgacccgatccgaccc
attcgcggggccattgggattcaagaagatattacgcagtccaaatgtagggctagtatt
aagaggcttttgagtgagaatgggtctagggcttttgacttggttttacatgatggctcg
cctaatgttggtggtgcttgggctaaagaagctactagccagaatgcgcttgttatcgat
tccgttaagctggctaccgagttcttggctcccaaagggacttttattaccaaagtcttc
aggtctcaggactataccgcagtcctttactgtcttagacagttgtttgagaaggttgaa
gtggacaaaccgtccgctagtcgttcagcatccgcagaaatatatgtcgtagcctttaag
tataaggcccccgccaaaattgatcctcgcctactggattttaagcacttattccaggga
ggtaaagaacctgcaaaggttattgacgtacttagaacaacaaaggcaaaacgacaccgt
gatgggtatgaagatggggctacaattctaaggaaggtctgctcagcttcagattttgtt
tggtctgatgctccccttgatatacttggttcagtgacatccattagttttgatgggtct
gagtgttctcctataaaggaacacgctttaacaactgaagaggttaaatctttatgtgat
gatttgcgtgttttagggaaacaagacttcaaatatcttctaaaatggcgaatgaatatt
agaaaggcattatccccgtcaaaggctgcggttgctgcaaccacaaaggttgatagtgag
tctaaaactgatgaagatgaagctgaagacgaagaccagaaggttcttaatgaaatggag
gaaatgacatatgcaatggaccgaaaaaagaaacgagcaaagaaagtactttcaaaaaga
cgtgctaaggacaaagcaaggaaggcaactggcatgcaagtagatgtaatggaggatggt
tatactgatcatgatttattctctttatcgtccatcaagggtaaaagagatctagtagca
gtagaagatactgaaaatgaggaagaaattaataaagtagtggatagtgatgatgaagat
acaggtgcagcaggtcaagatgattctcaaagtgatctggactctgatgaagagcgtaaa
agatatgatgagcaattggaagactttcttgatcaagcttatgagcgatttgtggctaga
aaagaaggaagtactaaacagaggaagcgtctaagacaaaactatgccaaggatggtgaa
tctttggaggacggggatgatgataatgtggtccattctgatcaagattctgacaatgaa
cggcctgctcaagaagcaaatccgcttgtggttccccttgatggagatgaggccactcaa
gaggagattgctgccaagtggtttagccaggatgtttttgctgatgaggatgaacatgaa
gatatggacaaggatgatagtgaagatgaattggaagtggttagacctgtaaagaaaccc
ccatctcctgaaaaagggaccaagaaaactacgcaacaaactcaagcttcaaaaaccaaa
gatgattttgagatagtcccagccccagaaacagattcgagtgatgactcatcctcagat
gaatcagaggaggatgtggagacgaaggccgagatattggccatggcaaagaagatgctg
aggaaaaaaacaagagaaactatgcttgatgatgcatataacaagtacatgtttcatgat
gacgggctgcctaagtggtttgtggatgaagaaaaaaagcactcacagccaataaagcct
gtaactaaagaagaagttgctgctatgagagcacaatttaaagaaattgatgctaggcct
gctaagaaagttgctcaagctaaagctaggaagaagcgggtggccatgcgtactcttgag
aaggtgcgcaagaaggcaaactctatatctgatctgccagatattaatgaacgttccaag
acaaagatgatagaccaactttacaagaaggcagcgccgaagaggcccaaaagggaatta
gtggtagcaaagaaaggggtacaagtcaaggctggcaaggggaaattacttgttgataga
agaatgaaaaaggatgcgagagctgtcaaagcagcaagtaagaaagggaaaggaaaggga
aagaactccaaggataataaaggtaaaaagcctggaaaagaattttcagccaaaggaggt
aaagctgggaacaaaaggaggtaa
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