Daucus carota (carrot): 108204472
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Entry
108204472 CDS
T05350
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108204472
04121 Ubiquitin system [BR:
dcr04121
]
108204472
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108204472
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
108204472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
108204472
NCBI-ProteinID:
XP_017229423
UniProt:
A0A166I8Y8
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Position
1:45110920..45115099
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AA seq
1133 aa
AA seq
DB search
MSFQVPNERRENSNNNSNSRTRIPQNQSGRGGRREWIPRGTNNVVATTNLTPTPAAGSES
SVVEGMPALVRQKRNGSGEGSSMGGRGRSNGSYGDFSKRSVLNGSGNRQNLGSRGQHYGK
PLNQKREKAKEQSVPKDSSLPQLVQEIQEKLMKGTVECMICYDMVKRSAPVWSCSSCYSI
FHLHCTKKWARAPTSVDLSAGKDQGFNWRCPGCQSVQLTSSKEIRYVCFCRKREEPPSDL
YLTPHSCGEPCGKPLEKEIPGAGVTKEDLCPHLCVLQCHPGPCPPCKAFAPPRLCPCGKK
VITTRCSDRKSVLTCGERCDKLLDCWRHRCEKICHVGPCDTCQVVINASCFCKKKSESVL
CGDLTVKGEVDVVDGLFSCSLPCEKLLSCGNHVCTAPCHPGPCGDCDLLPGKIKTCYCGK
TGLEQERHSCLDPIPTCSEICSKTLPCGSHKCKEVCHSGDCAPCQMLVTQKCRCGSTSRT
VECYKTMGDDKFACDKPCGQKKSCGRHRCSERCCPLSSSKNPLPGDWDPHLCSMSCGKKL
RCGQHSCESLCHSGHCPPCPETIFTDLTCACGRTSIPPPQPCGTPPPSCQLPCSVAQSCG
HSSTHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNQLCGKTRQCGMHACART
CHPSPCDSSTVPTSGLRASCGQTCGAPRRDCRHTCSALCHPSSLCPDVRCEFRVTITCSC
GNISATVPCDAGGSNNGHNVDSLLELSAVQKLPVPLQPVEANGKRIPLGQRKLTCDDECL
KMERKRALADAFGITPNLEALHFGESSAVSEVLSDLFRRDPKWVLAVEERCKFLVLGRGR
GGSSSLKVHVFCPMLKEKRDAVRLIAERWKLSISAAGWEPKRFIVVHVTPKSKAPARIFG
SKGTTTANMITPSVFDPLVDMDPRLVVALFELPSDADISALVLRFGGECELVWLNDKNAL
AVFSDPARAATAMRRLDQGSLYYGAVVLQNGGVPGVASGANAWGGPGAPKDGGSGLAMKG
NPWKKAVVQEPDWRVSSWGDEEETVGDSTRLEASVLKRNDAPIPASSNRWSILDAETTPS
SSTSVVQITDPGEQSKSQMVSTLESGSSSSVTVEKHMDEQTSETVEDWEKAFD
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcaagtcccaaatgaaagaagggaaaatagtaataacaacagcaatagtcgg
actcggattccccaaaatcaaagtggtcgaggtggacgaagagagtggattccgagaggg
actaataatgttgttgctactacaaacttaacgcctacgcctgctgctgggtctgagtcc
agtgtagttgagggaatgcctgcactagttaggcagaaacggaatgggagtggcgaggga
tcatctatgggtgggagagggaggtctaatggaagttatggggattttagtaagagatcg
gtgttgaatggcagtgggaacagacagaacttgggttcgagggggcagcattatggtaag
ccattgaatcagaagagggagaaagcgaaggaacagagtgtgcccaaggactctagtttg
ccgcagctagtgcaggaaattcaagagaagctgatgaagggtacggttgaatgcatgatt
tgttatgatatggtgaaaagatctgcgccagtttggtcttgttctagctgttactcaatt
tttcatctgcattgtaccaagaaatgggcacgtgctcctacttctgttgacctatcagct
ggaaaggatcagggatttaattggcgatgtcctggttgccaatctgttcagcttacatct
tcaaaggagattcgatatgtttgcttttgtagaaagagggaagaaccaccatctgatctt
tatctgacacctcattcgtgtggggaaccttgtggaaaaccacttgagaaagagattcca
ggtgctggtgtgaccaaggaggatctatgtcctcatctttgtgttttgcaatgtcatccc
ggtccttgcccaccttgcaaggcatttgctccaccacgattgtgtccttgtggtaagaag
gtaattacaacgagatgctctgatcgcaagtctgttcttacatgtggagagcgctgtgat
aaacttcttgattgttggcgtcatcgttgtgaaaaaatatgccatgtcggtccatgtgat
acttgtcaggttgtaattaacgcctcttgcttctgcaagaaaaagtctgaatctgttctt
tgtggagacttgactgtgaagggagaagttgatgtagtagatggtctattctcatgctct
ttaccctgtgaaaagctgcttagttgtggaaaccatgtctgcacagcaccttgccatcca
gggccatgtggggattgtgacttattaccaggaaagattaagacatgctactgtggtaaa
acagggttagaacaggaaagacatagttgtttggatccaattcctacctgttcagaaatc
tgcagcaaaacactcccttgtgggtcacataagtgtaaggaggtatgccactcaggtgat
tgtgcaccatgtcaaatgcttgtaactcagaagtgccgatgtggatcaacctctagaact
gtggaatgctacaagacgatgggcgatgacaaatttgcttgtgataaaccttgtggccag
aagaagagctgtgggaggcatcggtgcagtgagcgatgctgccctctatctagttcaaag
aatccattgccaggtgattgggacccgcatttgtgctccatgtcctgtggtaagaagttg
aggtgcgggcagcattcctgtgaatctctttgtcacagtggacattgccctccttgccct
gaaacaatatttactgacctgacatgcgcatgtggaagaacttcaattcctcctccacag
ccttgtggtacacctcccccttcatgtcagttaccttgctcagttgctcagtcttgtggc
cactcatccacccacagttgccactttggggattgtcctccctgttcagttcctgtagca
aaggagtgtattggaggacacgtggtcctcaggaacataccctgtggatccaaagacatc
agatgtaaccagctttgtgggaaaactaggcaatgtggcatgcacgcatgtgcaagaact
tgtcatccttcaccatgtgattcttctactgtacctacttctggtttgagggcatcttgt
gggcaaacatgcggtgcaccaagaagagactgtcggcatacatgcagtgctctttgtcac
ccctcttcattgtgccctgatgttagatgcgagtttcgggtcacaattacatgctcttgt
ggaaatattagcgctactgttccttgtgatgcagggggcagcaacaacgggcacaatgtt
gactctcttcttgagctttctgcagtccagaaactgcctgttccgcttcagccagtggaa
gcaaatggaaagcgaattccacttgggcaaaggaagctcacctgtgacgatgagtgtttg
aagatggaacgcaaacgtgcacttgcagatgcatttggtattactccaaatctggaagca
cttcattttggtgagagttcagctgtttcggaagtgctttctgacttgtttaggcgggat
cctaagtgggtcttagctgttgaagagagatgcaagtttttggtccttggcaggggtaga
ggtggttccagttcccttaaggttcacgtattttgtccaatgctgaaagagaagagagat
gcagtgaggctaatagctgagcgctggaagctatcaatcagcgctgctggctgggagcca
aagcgttttattgtggttcatgttactccgaaatcgaaagccccagctcgtatttttggt
tccaaaggtacaacaacagcaaatatgataactccatctgtgtttgatcctctggtagac
atggatcccaggcttgttgttgctctatttgaattgccaagtgatgcagatatcagtgca
ttggtcttgaggtttggtggagagtgtgagttagtctggttgaatgacaagaatgcattg
gctgtctttagtgatcctgctcgggctgctactgccatgaggaggttggaccaaggatct
ttgtattatggggcagtagtccttcaaaatgggggtgttcctggagtggcttccggagcc
aatgcttggggtggtccaggggctccgaaggatggaggatcaggtttggctatgaaggga
aatccatggaagaaggctgtggttcaggagcctgattggagggtgagttcatggggcgat
gaggaggaaacggtgggtgattccactcgattggaagcatctgttctgaagagaaacgat
gcgcctatccctgcttcatcgaacagatggagcattctagatgctgagaccactcctagt
tcatctacttctgtagtgcaaattacagatcctggggaacagtcaaaaagccagatggtt
tctacactggaatctggatcaagttcttcagttactgtggaaaagcacatggatgagcaa
acatcagagactgtggaggattgggagaaagcctttgattga
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