Daucus carota (carrot): 108204486
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Entry
108204486 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108204486
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108204486
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108204486
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
108204486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
108204486
NCBI-ProteinID:
XP_017229442
UniProt:
A0A166G6M2
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Position
1:complement(17573112..17583923)
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AA seq
602 aa
AA seq
DB search
MDHEDEDLQMALRMSMNEPPEPKRSKPRENSAGDSPESGRKSPRELMAAAAEKRMMAARG
GEKSREALISKVEKAEISESAANSSARVEGNKESVVCGSEISAAEAAMLFSMVFGEGVSK
DILAQWSNQGIRFSSDTETSMGLVQHEGGPCGVLATIQAFLLKHLLFAQEDLGQATLNVS
TDFESRRIQCVDPDIFASLTEERKLRALIRSLAEMLFLCGNNKHAAIASLSILDFEVKGP
NNIPKDEIIGKALEGLSLETDSDFQKVLRVTTYTSMDTAVRRIEEMIPLFQSRMGAMLFL
ISALLSRGLEFVQADRDDPSQPLVTAPFGHASQEIVNLLLSGQAVANVFDGRMDLGGGMF
VNGISTNVEVGFLTLLESLNFCKVGQHLKCPKWPIWVVGSESHYTVLFALDTKVQEENEL
EGRETQIRRAFDAQDQSGGGGFISVEGLHQVLRETNINLPSEKLENLSGAGFIVWNDFWQ
VLLNLDKNLGGVKDSTGLMGKKVFDLYHFNGIAKSVPNGSQGSFGGEIPIQRPRLTRLKV
SVPPRWTPEEFMADGPSASATNDKDIEVSKSEPAQHAPLVDCIRTRWPRAVCNWQGDSPS
IV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgaagatgaggatttgcagatggcgttgaggatgagtatgaatgagccgccg
gagccgaagcggagcaagccgcgggagaattcggccggagactcgccggagagtggccgg
aagtcgccgagggagctgatggcggcggcggcggagaagcggatgatggcggcgagagga
ggggagaagtctcgagaggctttgatttcgaaagtcgagaaggcggagattagtgagagt
gcggcgaattcgagtgctcgagtggaagggaacaaggagagtgtggtgtgcgggagtgag
attagtgcggcggaggcggcaatgttgttttcgatggtgtttggggagggagtgagtaag
gatattctagctcagtggagtaatcaggggattaggtttagttctgataccgaaacatct
atgggtttggtgcaacatgaaggcggaccttgtggtgtgttggcaactattcaagcgttt
cttctcaaacatcttctgttcgctcaagaggatcttggacaggcgacattaaatgtgtca
acggattttgaatcaaggagaattcagtgtgtcgatccagacatatttgcatctctaacg
gaagaaaggaagttaagagccttgatcagaagtttagctgagatgttgtttctttgtgga
aataacaaacatgctgcaattgcatcactgagtattcttgattttgaagtcaaggggcct
aacaatattccgaaggacgagatcattggaaaagcactcgaaggcctttcactagagaca
gattctgattttcagaaagttcttagagtaacaacatacacctcaatggatactgcagtt
cgaaggatagaggaaatgattcctctttttcagagccgtatgggggcaatgttattttta
atatctgctttgctttctcgaggactggaatttgttcaagctgacagggatgatccaagt
caacctttagtcaccgctccatttgggcatgcttctcaggagattgttaacctactactt
tccggtcaagctgtagccaacgtcttcgatggtagaatggacttaggtggagggatgttt
gtgaatggcatttccacaaatgtggaagttggttttcttactcttttagagtccctcaac
ttttgtaaagtaggtcagcatcttaaatgcccaaaatggccaatatgggtagttggtagt
gaatcccattacacggtcttatttgctcttgatactaaagtccaagaggaaaatgaactc
gagggtagagaaacacagattcgtagagcttttgatgcacaagatcaaagtggtggcggg
ggatttattagcgtagaaggcttacatcaagtcctccgggaaacaaatattaaccttcca
agcgagaaacttgaaaatttaagcggtgcaggttttatcgtgtggaatgatttttggcag
gttcttttgaatttagacaagaacttggggggcgtgaaggattcaactgggttaatgggg
aagaaggtatttgacctttaccatttcaatgggattgcaaaatcagttcccaatggtagc
caagggtcttttggaggagagattccaatacagagacccagactcacaagattgaaagtt
tcagttcccccgagatggactccagaggaatttatggctgatgggccctctgcctctgca
acaaatgacaaagatattgaagtctctaaatctgagccggctcagcatgcaccattagtt
gattgcatcagaacacgctggccacgtgcggtttgcaactggcaaggggactcgccaagt
atagtttag
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