Daucus carota (carrot): 108204532
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Entry
108204532 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108204532
KO
K17925
sorting nexin-13
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
108204532
Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108204532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
108204532
NCBI-ProteinID:
XP_017229512
UniProt:
A0AAF0W9F7
LinkDB
All DBs
Position
1:45940210..45955052
Genome browser
AA seq
1055 aa
AA seq
DB search
MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEV
EFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLL
QDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDL
FRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVA
LRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQS
PNVEGHKGDHVITGDQHHVEAATNIATSSQSKGTDMTLSRYETAKESVSDGSENSITNTS
HNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQ
GSDSSNALSTNLDKEISAQKAEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNTPTLN
KVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEF
CDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDID
GITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLL
SIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKV
ASPTSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSDEEGDKSTNLHGKDSGYD
IQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTP
GQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDD
WLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSAS
SNTSKPGSFELQLEAARRASNVKKMILSGAPAALVGLIGHKQYKRCARDIFYFLQSTICL
KQVTYEILELVLVSIFPEMGDVVLDMHEKMRTQSL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccatgaaaactatcgaagatctcatcgaagaagcgaagattcgaactgtttgg
tgggccctttgtatattctctgtctcgtacttcttaacacatacaagtaaatcaatgtgg
atgaatgttcctatatctattctcatagtttgtggattacggatattgtgtaatgaggtt
gagttccgctggaaggtccgtaatatccgtcggcagacctatctttcccacttagaaaag
aagcaattatctgttaatgattctcgcctttcgaattcccctccacctccaaaatggaag
agaaaaattgactctccagttgtggaggctgcgatggatgactttgtaaaaaaacttttg
caagattttgttgtagatttatggtattcagatattacaccagataaagaggcccctgag
cttatacatgcagtggtcatggatgtacttggagaagtgagtggtagagtaaaggaaata
aacttggttgaattgttgacgagggatattgtagaccttataggtaaaaatctagatcta
tttagaagaaaccaagctgctatcgggatggaagttatggggacgctgtcttctgaagaa
agggatgaaaggttgaagcatcatctcttggcttctaaggagcttcacccagcattgata
tctccagagtgtgagtacaaggttcttcaacggcttacgggcgcgcttttagcagtagca
cttagaccacgggaagcccaatgccctcttgttcgatgcattgcccgggagttggtaact
tgtttggtgttgcaacctctcataaatttggccagccctgcgtatataaatgagttgatt
gagtatattttgactgctcttaaagatgtgagcattaaacagataggtcttggtcaatcg
cccaatgtagagggtcataaaggtgatcatgtcattactggagatcaacatcatgttgaa
gctgccacaaatatagctacatcttctcaaagtaaagggactgacatgacactgtccaga
tatgaaactgcaaaagaaagtgtatcagatggttcagaaaattccatcaccaacacaagt
cataatgaggccatgcatccacgatctgctgaatgggctagagtccttgaggcagctacc
cagagaagaacagaagttcttatgcctgaaaatcttgagaatatgtgggcaataggaaga
aattacaaaaagaaggttcagaaacttgctgctgcaggaggtcagtctcctctaatacag
gggtcagattcaagcaatgcactgtctaccaatttggataaggaaatatcagctcagaag
gctgaagcattcacaagaatggagaatcaacctttaaccccggcacattcaaggcctccg
atagattctcgaccaagtaatcaaatcagtagtgcaacccttaatacaccaactctgaac
aaagtagtatctcttaagggaaaccgaattgtaaatgaaagtgagaattccacatcttct
attgctagtggaaataaaaataagatgactagatcaaatagcaccccggatttgaatact
gaaccagtaatgaaaactgattctatctgcaagagtggtggatcagttatatccgagttc
tgcgataaagatcttagcagcacgagtcaagctactaatgcaaaaagtgctctaaatatg
gtttcatctagtgagggacaacaggcggtgaagctaaggtgtcgggttgtgggagcatat
tttgaaaaacttgggtcaaaatcttttgcagtttattcaattgcagtgacagatattgat
ggaataacctggtttgttaaaagaagatacaggaattttgagagattgcatcgtcagctt
aaggatattcccaactatactttacatttgcctcccaaaagaatattttcttccagcacc
gaggatgcttttgttcatcaacgctgcattcaacttgacaagtatttgcaagatctcttg
tcaattgctaatgttgctgagcaacatgaagtgtgggattttttgagtgtttcatcaaag
aattattctttcggaaaatccccctccatgatgaaatccctggcagtcaacgtggatgat
gctatggatgacattgtacgccagttcaaaggggtttcagatggattgatacggaaagtc
gctagtccaacttcagtacctgaaccagcttcttcggcttatggaaggaatttatccttg
aaagaagatgagataaacaagttaaatctgagacgggatactgcagattcaattaatagt
ttttctgatgaggagggtgataaaagtaccaaccttcatggtaaggattcaggatatgat
atacaaactaatggttggcattcagacaatgaactgaactcaaaggaatttccaccaagg
gttgttacacgtagtgacgactttagaaacatctcttctgaggaaaaagcgttttctact
ctgcagtctgaattgtcaagtctccgtgcttctcccggggtgaaatccccattaactcct
ggacaactggacgatccaattggagtaccacaagagtggacaccaccaaatttaagtgta
cccctgttgaatttagttgataatgtcttccagttaaagagaagaggctggctaagacgg
caagtgttttggatatctaagcaaatactgcagctaatgatggaagatgctattgatgac
tggctcttgatgcaaatacattggctccgcagagacgatacaattgctcaaggaattcgc
tggatccaggatgttctttggcctggtggtaaattcttcctgaaactcaatattagaagt
aaagcagatgacaatgaaactaatgacatatcttcgcaaagtacaagcctttcagccagc
agcaatacctctaaaccaggttcgtttgagctccagcttgaggctgctcggcgagctagt
aatgtcaagaaaatgatcttgagtggagctcctgctgcactagtcggcttaattggacac
aaacaatacaagcgctgtgctagagacatattttatttcctccagtctaccatatgtttg
aagcaagtaacatatgaaattcttgaacttgtgcttgtatctattttccctgagatgggt
gacgtcgttttggatatgcatgaaaaaatgcggactcaatctctttaa
DBGET
integrated database retrieval system
