Daucus carota (carrot): 108204549
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Entry
108204549 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108204549 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108204549
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
108204549
TFIIIC, fungi type
108204549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_11
TPR_8
TPR_9
TPR_2
TPR_16
TPR_1
TPR_19
TPR_14
TPR_12
TPR_7
TPR_17
TPR_Slam
TPR_15
TPR_CcmH_CycH
RPN7
TPR_10
TPR_20
ARM_TT21_4th
SapB_1
MACPF_D2
Motif
Other DBs
NCBI-GeneID:
108204549
NCBI-ProteinID:
XP_017229536
LinkDB
All DBs
Position
1:complement(21878902..21892006)
Genome browser
AA seq
951 aa
AA seq
DB search
MTNMEEDEQIATDNVTNSTSTNTNQTTLYSPLQLEAEDEYGDDDGNDDVGDEEEEEEEDD
MSYKMRFEGEMDPLDFIENDASAVDKYHQFQRIENEYEALAARKQRIGVFIHISCGSNPS
KKLRNDDDHVETFEEIMEAMAYNSGRKRRRKNKKKGRRRGSKKKVNPVVARKLGEATLHY
SNERYEEARCLLKEVIRLDPYLPDPYYKLGLVYEQLKDKKKQMGCYMLAAHSSPKDGSLW
KLLVLLSVEEGNNEQAMYCLSKAITADPQDLSLRFDRASLYVELGDYLKAAESYEQISRL
RPELVEAELRPELVEALKKATKLYQKCGQRERAVSILEEYVKRNQTEAEISIIYLLVSML
IEGRAYIKALNHIEHAQQVYCAGKEFPLPLTIKAGVCQAHLGNLEKAEAIFCVLQRGNAC
DRPQIVTEVADSLANLKHYELALKYYMMLEAIGDNDSGVLYSRIAECNLHLGDRLRSIEY
YYKALPKLNDSVDTRLKLASLLLEESKDDEAISILCPPTDHECTYEHNLDKPELWWTNFT
IKLKLSQIYKDRGSLDSFVDTIYPCVRKSFLEAIQQKDRAKRKLTRSELFERAKVLDNRQ
NDNVFHGFRPMASTSDLTKATRAKKLLQKKEALREEKRAAALAAGVEYKSDESDVEPPQV
TRRRPLPNLLVDEEYHCLIIDLCKSLASLQKYWEALEIIDISLKLACSTLSVERKEELRS
IGAQIAYNIGDPSHGWDCARYIVNQHPYSFAAWNCYYKVISRLDNRYSKHGKFLHSMRVK
HKDCVPPYIIFGHQLTMISQHQAAAKDYLEAYKLMPDNPLINLCVGSALINLALGHRLQN
KHQCVMQGLAFLFKNLLLSENSQEALYNIARAYHHVGLVTLAATFYEKVLAIREKDYPIP
KLPNENQDGVESRKPGYCDLGREAAYNLHLIYKSSGAVDLARQVLKDHCSF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacatggaggaggatgaacaaatagcaacagataatgtaacaaacagcaccagc
accaacaccaaccaaacaactttgtattctcctctacaactagaggcagaagacgagtac
ggagatgatgacggaaacgacgatgtcggagatgaagaagaagaggaagaagaagacgat
atgagttataagatgagattcgaaggcgagatggatccattggatttcattgagaatgat
gcctcggccgttgacaagtatcatcaatttcagcgtatcgagaatgaatatgaagctctc
gctgctcgaaagcaaagaatcggggtttttatacatatatcttgtggcagcaatccatca
aaaaagcttagaaatgatgacgatcatgtagaaacgtttgaagaaataatggaagcaatg
gcttataattcaggacgaaaacggagaaggaagaacaagaagaaaggtaggagaagggga
tcaaagaaaaaagttaatccagtagtggcacgaaagcttggtgaagctacacttcattat
tcgaatgaacgttatgaagaagccagatgtcttttaaaagaagttattcggcttgatcct
tatctgcctgacccttattacaagcttggcctcgtctatgagcaacttaaagataaaaag
aagcaaatgggttgctacatgcttgctgcccattcgtcaccaaaggatggatctctctgg
aaacttcttgttctattgtctgtagaagaaggtaataatgaacaggctatgtattgcctt
tccaaagctattacagccgatcctcaagatctcagccttaggtttgaccgtgcttcactt
tatgttgagctgggtgattatctaaaggctgctgaatcgtatgagcaaatttcgcggctc
cgtcctgaacttgttgaagcggagctccgccctgaacttgttgaagcactgaaaaaggcc
acaaagttatatcaaaaatgcggtcagcgtgaacgtgctgttagtattctggaggagtac
gttaaacgtaatcaaactgaagctgaaatcagcattatttatcttctagtatcaatgctc
atcgaaggcagagcatatatcaaggctctgaatcatattgagcatgcacaacaggtgtat
tgtgccggcaaagaatttccattacctttaactattaaagcaggagtgtgtcaggctcac
ctcggaaatcttgaaaaagcagaggctattttttgtgtcttgcaaaggggcaatgcatgt
gatcgtccacaaatagtcactgaagttgctgattcattggcaaatcttaaacactatgaa
cttgcattgaagtactatatgatgttagaagcaattggcgacaatgacagcggtgttcta
tattcaaggatagcagaatgtaacttacatctaggcgatcgactacgatcaattgagtac
tactataaagctctgcctaaactcaatgacagtgttgatacacggctaaagctagcatcg
cttcttctggaggaaagcaaagacgacgaagccataagtatactttgtcctcctactgat
catgagtgtacatatgaacacaacttggacaaacccgaactatggtggacaaatttcact
ataaagctaaagctttcccagatctacaaagatagaggatccttggactcctttgtcgat
acaatatatccctgtgttcggaagtcatttcttgaggctattcaacaaaaggatagagca
aagagaaagttaacaagaagtgaattgtttgaaagagccaaagtgctagacaatcgtcaa
aacgataatgtattccatggctttagacctatggcgtcaacgtcggatttaacaaaagct
accagagcaaagaagttgcttcaaaagaaagaagcattaagggaagaaaaaagagctgct
gcattggctgcaggagttgaatataaaagcgatgaatcagatgttgaacctcctcaagtc
acaaggagacgtcctctgccgaatctcctggtagacgaggaatatcattgcctcataata
gatttatgcaagtcacttgcatctcttcaaaaatactgggaagcacttgaaatcattgat
attagtctgaaattggcatgtagcactctctctgtagagaggaaggaggagcttcggtcc
attggagctcaaatagcctataatatcggtgatccttcgcatggatgggattgtgcacga
tacatagtcaatcagcatccatacagcttcgctgcatggaactgttactacaaagtaatt
tcgaggctggataataggtattcgaagcacggcaagttccttcattctatgcgagtaaaa
cacaaagattgcgtacctccgtatattatattcggccatcagcttactatgatcagtcag
catcaggcagctgcaaaagattatttagaagcttataaactgatgccagacaatcccttg
atcaatttatgtgtaggttctgccttaattaacttagcccttggtcatagactccagaac
aaacatcaatgtgtcatgcaaggcttggcattcctctttaagaatttgctactttctgaa
aacagccaggaagcattatacaacatagctcgtgcatatcaccacgtgggtcttgttacc
cttgctgctacattttatgagaaggtgcttgcaatacgtgaaaaagactacccaatacct
aagctacctaatgagaatcaagatggtgtcgagagtcggaagccaggatactgtgacctt
ggtagagaggctgcatacaatctacatttaatatataagagtagtggagcagttgatctt
gctaggcaggtgttaaaagatcactgctcattttga
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