Daucus carota (carrot): 108204670
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Entry
108204670 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 2 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108204670
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108204670
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
108204670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
RING_XB3-XBAT31
CC_Bre1
TolA_bind_tri
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
108204670
NCBI-ProteinID:
XP_017229710
UniProt:
A0A166GTT8
LinkDB
All DBs
Position
1:complement(29471285..29486547)
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AA seq
875 aa
AA seq
DB search
MENTDSDEPKKKLARLDSLPLPMARHSTNSPDNNKSVSAAVLQYRNQKLVQKLDVQKHEL
HNLEARIKELKDKQASYDEILITVNQLWNQLVDDLIFLGARAGAGKSTMQMLDHADRVRG
SVPSCPPEEMFLCRLLELSCGSDGSLNIKEALTSRHSATLEMMKFLHDTIEAQRDKAESI
SQVLLGKPSREDVVMQLSKIDNMMKEEANNLREVIDILHLKHKEYADEVQACIGGHSVDQ
LDIKRLSGELEESMAELEESRRRLVNLKMQKDAASSVHSLVSGAVNGSLSPEKHRDKSMG
LRELKDSIEETKILAADRFTELQDAHEDNLILSKQLQVLQNELNDDKYVHSSRQYTSLND
QLQHWSAEAERYKMLTDTLQADRSLVMRREKELNGKAEAVDVAKTGISNAESKIAELEQK
LQNCVTENNELEIKMEETLEDSGRKDIKTEFHVMASALSKELGLMESQLTRWKETADEAL
NLRENAQSLKTLLNEKTSEKKNLEAKCTEQMAKIKSLKEVSEKLQKEKQELLIFLDMLGQ
QIHDNRDVREIKESEKRALSQAAVLRNALEEHGLELRVKAANEAQAACLQRLSAAESEIA
DLRAKLDAVERDVRELTEAIKIKDGETEAYISEIETIGQAYEDMQTQNQHLVQQVTERDE
YNIKLVSESVKTKQAQNFLLSEKQALAKQLQQVSAVLESLKVRIAHGEQQMKVSIVEALT
STQEDRQLAVNLEKARWELSDAEKELKWLKSAVSSSEKEYEQVQRKWDEIQKELDIEKSE
RKKLDDELVELNGKVDEISSETGEAAIQKLQDEIKDCKGILKCGVCFDRPKEVVIVKCYH
LFCNPCIQRNLEIRHRKCPGCGTAFGQSDVRFVKI
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacagattcagatgagccaaagaaaaagctagcccgtctggactctcttcca
ttgcccatggctcgccactcaactaattccccagataacaacaaatctgttagtgcagca
gttcttcagtatcggaatcagaaacttgttcagaaattagatgtacagaagcatgagttg
cacaatcttgaagccagaataaaagaactcaaggacaaacaggcctcatatgacgagata
ttaatcacagtgaaccaactatggaatcagttggttgatgatttaatttttcttggcgca
cgtgccggggcagggaaaagtacgatgcagatgttggatcatgcagaccgtgtcagaggt
tcagttccatcatgccccccagaggagatgtttctttgtagattgttagaattaagctgt
ggcagtgatggatctctaaatattaaagaagcccttacttctcgccattctgcaactcta
gaaatgatgaaattcttgcatgatactattgaggcacaaagagacaaagctgaaagcata
agtcaggttttgcttgggaagccatctagggaagatgttgttatgcagttgtctaagatt
gacaatatgatgaaagaggaggctaataatctgcgtgaggtgattgatattttacacttg
aagcataaggaatatgctgatgaggttcaggcttgtattggtggtcactcagtggatcaa
ttagatattaaacgtctctcaggtgagctggaagagagcatggctgaactcgaagaaagt
agaagaagactggttaaccttaaaatgcagaaggatgcggcatctagtgtgcatagtctt
gtttcgggggccgttaatggaagtttgtcaccagagaagcatagagataagtctatgggt
ttacgagagttgaaagattcaattgaggaaacaaagatattggcagctgatcgttttact
gagctacaagatgcacacgaggataatttaattctgtccaaacagctgcaagttcttcag
aatgaactaaatgatgataagtatgtccattcatcccggcaatatacttcactgaatgac
cagctccaacattggtctgccgaagcagaacggtacaaaatgttgacagatacactgcag
gctgacaggtctttggtcatgagaagggagaaagaattaaatggaaaagcagaagctgta
gatgttgcgaaaactggaattagtaatgctgaatctaagattgcggaacttgagcagaaa
ttgcaaaattgtgtcactgagaataatgagttggagattaaaatggaagaaactttggaa
gattcaggaagaaaagatattaagaccgaatttcatgtgatggcatcggctctttctaaa
gaattgggactgatggaatctcagttgactcggtggaaggagacagctgatgaagccctt
aatttacgtgaaaatgcccagtcactaaaaaccttattgaatgaaaagactagtgaaaag
aagaatttggaagctaaatgtactgagcaaatggctaaaatcaaatctctgaaggaagtt
agtgagaaattgcagaaggagaaacaggaattgctaatttttctggacatgctaggacaa
caaatacatgacaatagagatgtgagggaaattaaagaatcagagaaaagagctctttct
caagcagctgttttgagaaatgctttagaagaacacggtttagagttgagggtgaaagct
gcaaatgaagcacaggcagcttgcctacaaagattatctgctgcagaatctgaaatagct
gatttgagggccaaacttgatgctgttgaaagagatgttcgggagctcacagaggctatc
aaaatcaaagatggagagacggaggcttatatatctgagatcgagactattggtcaagct
tatgaagatatgcagacacaaaaccaacatttggtacagcaggttactgagagagatgaa
tacaatattaagctggtttccgagagtgtgaagacaaagcaggcacaaaatttcctactt
tcagagaagcaagcactggcaaagcaacttcaacaagtcagtgcagtgttggaatctttg
aaagtgaggatagctcatggtgaacaacagatgaaagtttcaattgtggaagctttgaca
tctactcaagaggatagacaacttgcagtaaacttggaaaaagcaaggtgggaactttca
gatgctgagaaggaattgaagtggctgaaatctgcagtttcctcgtctgagaaggaatat
gagcaggtccagcgaaagtgggacgaaattcaaaaggaactggacattgaaaaaagtgag
aggaagaagcttgatgatgagctcgttgaactaaatggaaaagtggatgagattagttca
gaaactggggaggctgccattcagaagctccaggatgaaattaaggattgcaagggtatt
ctcaaatgtggagtgtgttttgatagacctaaagaggtggttattgtcaagtgctatcat
ctattttgcaatccctgcattcaaagaaatctagagatccgacatcggaagtgtccaggt
tgtggaactgcatttggacaaagtgatgttcgttttgtgaagatctaa
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