Daucus carota (carrot): 108204796
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Entry
108204796 CDS
T05350
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108204796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108204796
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108204796
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Motif
Pfam:
LRR_6
LRR_4
F-box
F-box-like
LRR_8
Motif
Other DBs
NCBI-GeneID:
108204796
NCBI-ProteinID:
XP_017229901
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Position
1:complement(10511521..10515175)
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AA seq
347 aa
AA seq
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MVAGGGMKISGGGAINEWKDIPMELLLRIVSLVDDRTVIVTSGVCSGWRDAVCWGLTRLS
LSWSKKNMNNLVLSLAPKFSKLQVLVLRQDNSQLQDNAVQAIANFCPDLQDLDLSKSFKL
TDCSLYALAHGCPNLTKLNISGCSAFSDTALSYLSDYCRKVQTLNLCGCVKAASDSALKA
IGYNCTRLQYLNLGWCENVGDIGVMSLAYGCPDLKVLDLCGCVLITDASVVALANNCLRL
QSLGLYYCQNITDRAIYALAHTRVKNKQSVWESVRNRYEEEGLKSLNISQCTALTPPAVQ
ALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAFQAHRATGNVQAH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggttgctggtggggggatgaagataagtggtggtggagcgatcaatgaatggaaagac
attccaatggagcttctgctgcggattgtgtcgctcgttgatgatcgaacagtgattgtt
acttcgggtgtttgtagtggctggagagatgctgtttgctggggattaactcggttgtcc
ctttcttggtccaagaagaacatgaataacttggtgctatctctggctcctaaattctca
aaactgcaagttttagttctccgtcaggataactcacagctgcaggataatgctgttcag
gctattgcaaacttttgtcctgacctgcaggatctagacctaagcaagagtttcaaactc
actgattgctccctatatgccttggctcatggttgccctaatctgacaaagctcaacatc
agtgggtgctcggcattcagtgatactgctctctcatatttaagcgattattgcagaaaa
gttcaaacattaaatctctgtggatgcgtcaaagctgcatctgactctgccttgaaggct
attggatataattgtactcggttgcagtatcttaacctggggtggtgtgagaatgttgga
gatataggtgttatgagtctagcttatgggtgccctgatctaaaagtacttgatttgtgc
ggttgtgttcttataacagatgcgagtgtagttgctttggcaaacaattgccttcgtttg
cagtctctcggtctctactactgccaaaatatcacagatagagcaatctatgcccttgct
cacactcgagtgaagaacaaacagagtgtgtgggaatctgtgaggaataggtacgaggaa
gaagggcttaaaagtttgaacatcagtcagtgcacagctcttactcctccagctgtgcaa
gccttgtgtgactcatgtcctgcacttcatacatgcccaggaagacattcgctgatcata
agtgggtgtctcaacttaacgtctgtccactgtgcctgtgcatttcaagctcatcgcgcg
accggtaatgttcaggctcactga
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