KEGG   Daucus carota (carrot): 108204796
Entry
108204796         CDS       T05350                                 
Name
(RefSeq) F-box protein SKP2A isoform X1
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
dcr  Daucus carota (carrot)
Pathway
dcr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108204796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108204796
Ubiquitin system [BR:dcr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108204796
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box F-box-like LRR_8 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 108204796
NCBI-ProteinID: XP_017229901
UniProt: A0AAF0W250
LinkDB
Position
1:complement(16577923..16581743)
AA seq 431 aa
MIIKKDILLKKCILDVEPTLRSQSRSCQVASLRLLILFLTRTHLLSERERERAVYNNTHK
KEQLTQHNLKKDHRIKKCILLSDKMVAGGGMKISGGGAINEWKDIPMELLLRIVSLVDDR
TVIVTSGVCSGWRDAVCWGLTRLSLSWSKKNMNNLVLSLAPKFSKLQVLVLRQDNSQLQD
NAVQAIANFCPDLQDLDLSKSFKLTDCSLYALAHGCPNLTKLNISGCSAFSDTALSYLSD
YCRKVQTLNLCGCVKAASDSALKAIGYNCTRLQYLNLGWCENVGDIGVMSLAYGCPDLKV
LDLCGCVLITDASVVALANNCLRLQSLGLYYCQNITDRAIYALAHTRVKNKQSVWESVRN
RYEEEGLKSLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAFQ
AHRATGNVQAH
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgataataaaaaaagatatcctcttaaaaaaatgtatacttgatgtagagcccacttta
aggtcccagtcacgctcgtgccaggtggcttccttgcgtctcctaattctctttcttacc
cgtacgcatctcctgagcgagagagagagagagagagctgtttataataatacacacaag
aaagagcagctcacacaacataacttgaagaaagatcatagaatcaagaagtgcattttg
ttatcagataaaatggttgctggtggggggatgaagataagtggtggtggagcgatcaat
gaatggaaagacattccaatggagcttctgctgcggattgtgtcgctcgttgatgatcga
acagtgattgttacttcgggtgtttgtagtggctggagagatgctgtttgctggggatta
actcggttgtccctttcttggtccaagaagaacatgaataacttggtgctatctctggct
cctaaattctcaaaactgcaagttttagttctccgtcaggataactcacagctgcaggat
aatgctgttcaggctattgcaaacttttgtcctgacctgcaggatctagacctaagcaag
agtttcaaactcactgattgctccctatatgccttggctcatggttgccctaatctgaca
aagctcaacatcagtgggtgctcggcattcagtgatactgctctctcatatttaagcgat
tattgcagaaaagttcaaacattaaatctctgtggatgcgtcaaagctgcatctgactct
gccttgaaggctattggatataattgtactcggttgcagtatcttaacctggggtggtgt
gagaatgttggagatataggtgttatgagtctagcttatgggtgccctgatctaaaagta
cttgatttgtgcggttgtgttcttataacagatgcgagtgtagttgctttggcaaacaat
tgccttcgtttgcagtctctcggtctctactactgccaaaatatcacagatagagcaatc
tatgcccttgctcacactcgagtgaagaacaaacagagtgtgtgggaatctgtgaggaat
aggtacgaggaagaagggcttaaaagtttgaacatcagtcagtgcacagctcttactcct
ccagctgtgcaagccttgtgtgactcatgtcctgcacttcatacatgcccaggaagacat
tcgctgatcataagtgggtgtctcaacttaacgtctgtccactgtgcctgtgcatttcaa
gctcatcgcgcgaccggtaatgttcaggctcactga

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