Daucus carota (carrot): 108204985
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Entry
108204985 CDS
T05350
Name
(RefSeq) ABC transporter B family member 2 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108204985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108204985
04147 Exosome [BR:
dcr04147
]
108204985
04090 CD molecules [BR:
dcr04090
]
108204985
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108204985
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108204985
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108204985
CD molecules [BR:
dcr04090
]
Proteins
108204985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
Zeta_toxin
AAA_16
AAA_21
RsgA_GTPase
AAA_15
nSTAND1
AAA_19
AAA_30
Rad17
Motif
Other DBs
NCBI-GeneID:
108204985
NCBI-ProteinID:
XP_017230205
LinkDB
All DBs
Position
1:complement(51493287..51500883)
Genome browser
AA seq
1252 aa
AA seq
DB search
MSFQVASSSGVHDAGKNNNLKEEEEKTKKPPTPSVSLFKLFAFADSFDYFLMFFGSVGAC
IHGASVPVFFIFFGKLIDVIGLAALFPAAASHKVAKYSLDFVYLSAVILFSSWMEVAFWM
YTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIVVQDAISEKVGNFMHY
ISRFITGFIIGFIRVWQISLVTLSIVPLIAIAGGVYAFVAFGLIARVRKSYVKAGEIAQE
VIGNVRTVQAFAGEDKAVKSYTSALQDTYKYGRRAGLAKGLGLGTLHCVLFLSWSMLVWF
TSIIVHKHIANGGDSFTTMCNVVIASLSLGQSAPDITAFLRAKSAAYPIFKMIERNTVNK
NSGKKGGKLQKVEGHIQFKDVYFSYPSRPDVVITNKLCLDISPGKVIALVGGSGSGKSTV
ISLIERFYEPLSGQILLDGIDIRELDIKWLRHQIGLVNQEPALFATTIRENILYGKDDAT
IEEITRAAKLSEALAFINNLPERFDTQVGERGVQLSGGQKQRIAISRAIVKNPAILLLDE
ATSALDAESEKSVQEALDRVMVGRTTIVVAHRLSTIRNADVIAVVQNGKIVETGSHEELI
LKQDGAYSSLVELQEAASKQQLPSNGPLGQPLSSKFSRELSGRTRSFGGSFRSDKESVGK
VGFEVETVKSSPVSSGRLYSMVTPDWMYGVSGTICALCAGALMPLFALGITQALVSYYMD
WDTTRHEVKKISLLFCVGAVVTVIIHAIAHLSFGIMGERLTLRVREGMFSAILRNEIGWF
DNTENTSSMLASRLESDATLLRTVVVDRATILIQNVGLIITSFIIAFILNWRLTLVVIAT
YPLIISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKVLDLYGREL
VEPSKRSFTRGQIAGIFYGVSQFFIFSAYGLALWYGSVLMGKGLASFKSVMKAFMVLIVT
ALAMGETLAMAPDLLKGNQMVASVFELLDRKTEVVSDVGEDVTKMDGTVELRGIQFSYPS
RPDVLIFKDFNLRVHAGKTMALVGQSGSGKSSVLALILRFYDPLAGKIMIDSKDIRKLKL
KSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVIEASKLANAHSFISALPEGYSTK
VGERGVQLSGGQKQRVAIARAVLKNPAILLLDEATSALDVESERIVQSALDRLMQNRTTI
VVAHRLSTIKNADQISVLQDGKMVEQGTHATLVENRDGPYYRLISLQQQQQM
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccaagttgcatcaagttccggcgtccatgatgccggaaaaaataataatctg
aaggaggaggaagaaaaaaccaagaaaccgccaactccaagcgtctcgttatttaaatta
ttcgcgtttgcggattcttttgattattttctaatgttttttggatcggtgggagcttgt
attcatggtgcttctgttcctgttttctttattttctttggaaagttgattgatgttata
ggacttgctgctttgtttcctgctgcagcttctcacaaagttgccaagtattcgttggat
tttgtatatctaagtgcagttatattgttttcatcatggatggaggtggcgttctggatg
tatactggagaaagacaagcagcaaagatgaggatggcctatctgaggtctatgttgaat
caagacatcagtctttttgatactgaagcttccaccggagaagtcatttctgcgatcacc
agcgatattatcgtagtccaggatgccatttctgagaaggtgggaaactttatgcactac
ataagcaggttcataacagggtttataatagggtttataagggtatggcagataagtctt
gtcacactctccatcgttcccctcatagctattgctggtggtgtttacgctttcgttgct
tttggtctcattgcccgtgtccgcaaatcctatgtcaaagctggggaaattgctcaagag
gtgatcggaaatgtgagaacagtacaagcatttgcaggggaggacaaggcagtgaaatca
tatacatcagcattacaggacacctacaagtatgggaggagagcaggtctagccaagggt
ctaggacttggcaccttgcactgtgtacttttcctttcgtggtcgatgctggtttggttt
acaagcataattgttcacaagcatattgctaatggtggagattccttcacaaccatgtgc
aatgttgttattgcaagcttgtcacttggacagtcagcccctgatattactgcatttctc
cgagcaaagagtgctgcctatcctatctttaaaatgatagagagaaatactgtaaacaaa
aacagcggaaaaaagggtggaaagttgcagaaagttgaggggcacatccaattcaaggac
gtgtactttagttacccatcccgccctgatgtggtaatcaccaataagctctgccttgat
atttctcctggaaaagtgatagcacttgtgggaggaagtggatctggaaaaagcacagtt
atatcgttaattgaacgcttctacgagcccctctctggacagattttactagatggaatt
gatatcagagaacttgacataaagtggcttaggcatcaaattggattagttaatcaagag
cctgccctttttgctacaaccatcagagagaacattctctatgggaaagatgatgcgacc
attgaagagatcacacgtgctgcaaaactttcagaggcactggcttttatcaacaatctt
cctgaaagatttgacactcaggtgggggaaagaggggtgcaactatcaggtgggcagaag
cagagaattgcaatatctcgtgccatagttaaaaaccctgctatacttcttttggatgag
gctacaagtgcactcgatgcagagtctgaaaagagtgtgcaagaggcccttgaccgtgtg
atggttggacgcacaactatcgttgtggctcatcggctttctaccataagaaacgcagat
gtaatagctgttgttcaaaatggaaagatagtggaaaccggaagccatgaagaacttatt
ttaaaacaagatggtgcttattcatcgcttgttgaactccaggaagcagcttccaagcaa
caactcccctcaaacggtccattgggacaaccactcagcagtaaattttcacgtgaatta
tctggaagaacaagaagttttggcggaagttttcgttcagataaagagtctgttggcaaa
gttggttttgaagtagaaactgtcaagtcgtctccagtttcctctggaagattgtactcc
atggttactccagattggatgtatggggtttccggaaccatatgtgcactttgtgctgga
gctttgatgcctctctttgcccttggtatcactcaagctcttgtatcttattatatggac
tgggacacaacacgccatgaagttaaaaagatctccctgctcttctgtgtgggcgctgtt
gttactgtcatcattcatgctattgctcacctgagttttgggataatgggagagcgcctt
actcttcgtgttcgtgagggaatgttttctgctattttaaggaatgagatcggatggttt
gataatacagaaaacacaagttctatgctcgcatctagattagagagtgatgcaacttta
ctgcgaactgttgttgttgaccgcgctaccattttaatacagaatgtaggtctgatcatc
acttcattcatcatcgcttttattttgaattggaggctcacacttgttgtcattgccaca
tatccgttgatcataagtggccacattagtgagaaactcttcatgaaagggtatggtggg
aacttgagcaaagcttatcttaaagccaacatgcttgctggtgaggcagtgagtaacatt
cgcactgttgctgcattttgttcagaggaaaaggtactcgatctttatgggcgtgagctt
gtggagccttccaagcgttcgtttactcgtggtcaaattgctggtatattttatggagtc
tcgcaattcttcatattttcagcttatggcctagccctgtggtatggttctgttttgatg
ggaaaaggactagctagctttaagtctgttatgaaggcatttatggttttgatagttact
gcattagccatgggtgaaacattggcaatggcaccggaccttctaaaaggtaatcaaatg
gtagcatcagtttttgagttgctggaccgtaagacagaggtggtgagtgatgtcggagaa
gatgtcactaaaatggatggtacagttgagctcaggggtattcagttcagctatccctca
aggccagacgttctaattttcaaagactttaacctaagagttcatgcaggcaagacaatg
gctctagtagggcaaagtggatcaggaaaaagctctgtacttgctttaatacttcgattt
tatgacccgttggctgggaagattatgattgatagcaaagatatcaggaaactaaagctc
aagtctctccggaagcacattggtcttgtccaacaagaaccagctctgtttgcaacatca
atctacgaaaatatactttatggtaaagagggagcctctgaggctgaagtaatagaagct
tcaaaacttgctaacgcgcatagtttcatcagtgctcttcctgaaggctactcaactaaa
gttggagaacgcggtgtgcaattgtctggtggtcagaaacaaagagtggctattgctcgt
gctgttctaaaaaaccctgcaattttgttactagatgaggccacaagtgctcttgacgtg
gagtctgagcgtatagtacaatccgctttagacagacttatgcagaaccgaacaacaatt
gtggtggcacatcgactatccaccataaaaaatgcagaccaaatatcagttttgcaggat
gggaagatggtagagcaaggaactcacgccactcttgtcgaaaacagagatggtccatac
tacagattaatcagcctacagcagcagcaacaaatgtaa
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integrated database retrieval system
