Daucus carota (carrot): 108204996
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Entry
108204996 CDS
T05350
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108204996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108204996
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108204996
Membrane trafficking [BR:
dcr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108204996
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108204996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
Motif
Other DBs
NCBI-GeneID:
108204996
NCBI-ProteinID:
XP_017230222
LinkDB
All DBs
Position
1:44056564..44064386
Genome browser
AA seq
367 aa
AA seq
DB search
MERDSKKEARNYVWEGAIPLQIHLHQSEVTTLPSPPPALILAPRIGYLPLLVPQVKPFFS
SALPPGVDTVWFDYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPANILTPCENE
DSVKWSYINSLKEAAYIFHGNCKNVMNMSQADQFELWQSVMNAGNLESYLRVSSKLKFGI
FGDTFSLRLNSSSVKSRERAELDAAGTVTSGRIPVRLYVWSIQEDFDNLEDAPSFDSWDK
ISYINRPAEIREEGKCFSLGDAMKMLLPEIFGDKASASGDISKTEVEDYLKLNPEEASNI
EGTKVMAESKDVESCNLSKSAEIKLLRIQGIEPKLEIPFTWLANNLMNPDHFLHICVYVK
VPELTTI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagagagatagcaagaaagaagcaagaaactacgtatgggaaggagcgatccctctt
caaattcatcttcaccaatctgaagtgactacgcttccttctcctcctcctgctctcata
ttggctccccggattggatatctaccccttttggttccgcaagtcaagcctttctttagt
agtgcacttcctccaggggttgacactgtatggtttgactacaaaggactacccctcaaa
tggtatattccaacaggagtcctttttgatcttctatgtgcggagccagaaagaccgtgg
aatctaacagttcatttcagaggatatccggcaaatattttgacaccttgtgaaaatgaa
gatagtgtaaagtggagttatattaattcactgaaagaggcggcatatatattccacggg
aactgtaagaatgtcatgaatatgtcacaagctgatcagtttgaactttggcaatctgtt
atgaatgcaggtaacttggaatcctaccttcgagtttcatcaaagcttaaatttggaata
tttggagacactttttccttgagattgaactcatcatctgttaaatctcgtgaaagagcg
gaactagatgctgctggtacagtaacatcaggtagaattccagtccggttatatgtttgg
agcattcaagaggattttgacaatctcgaagatgcaccttcttttgacagctgggataaa
atttcatacataaatcgacctgctgagattcgtgaagaaggcaaatgcttcagtttgggt
gatgcaatgaagatgctactgccagaaatttttggagacaaggcctcggcaagtggtgat
atatctaaaacagaagttgaggattatttgaaattgaatccagaagaagcgagcaacata
gaaggcacaaaagtgatggcagaaagtaaagatgtggaatcctgcaacctatcaaaatct
gctgagatcaaacttcttcgtatccaagggattgaaccaaagttggagattccttttact
tggctggcaaacaacttaatgaaccctgaccatttccttcacatttgtgtttatgtcaaa
gttccggaactaaccaccatataa
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