Daucus carota (carrot): 108205018
Help
Entry
108205018 CDS
T05350
Name
(RefSeq) galacturonosyltransferase 8
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00520
Amino sugar and nucleotide sugar metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108205018
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108205018
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108205018
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108205018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Nbl1_Borealin_N
Motif
Other DBs
NCBI-GeneID:
108205018
NCBI-ProteinID:
XP_017230252
LinkDB
All DBs
Position
1:complement(1173258..1176123)
Genome browser
AA seq
554 aa
AA seq
DB search
MGSTTPLGSAVKLLLLLSVATLLFLFITLSSDLPRAVAYNHHHDADASSYNGVELSFHTS
RSVLALKSDPLRPRLDQIRKQADDHKSLVLAYASYARKLKLENSKLVRVFADLSRNYTYL
LSSPAYQPLHSSDSSSIDESLLRQFEKEVKERIKLTRQVITEAKESFDNQLKIQKLKDTI
FAQNEQLTKAKKQGAFSSLIAAKSIPKSLHCVTMRLMEERIANPDKYSDEGKETPPVIED
PNLYHYAIFSDNVIAASVVVNSAVKNAKDPSQHVFHVVTDKMNLGAMQVMFKMRDYNGAH
VEVKAVEDYKFLNSSYVPVLRQLESANLLKFYFENKLENATKDTTNMKFRNPKYLSILNH
IRFYLPELYPKLHRILFLDDDIIVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYMNF
SHPLIKQNFSPKACAWAYGMNFFDLDAWRKEKCTEQYHYWQNLNENRTLWKLGTLPPGLI
TFYSTTKPLDKSWHVLGLGYNPSINMEEIRNAAVVHFNGNMKPWLDIAMNQFRSIWTKYV
DYDNEFIQDCNFGL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcacgacgccgcttggatccgccgtgaagctcctcctcctcttgtccgtggcc
actttactcttccttttcatcacactctcctccgatctcccccgagccgttgcttataat
catcatcatgatgctgatgcttcttcttataatggagttgaattatcatttcatacttca
agatctgtattggccctcaagtctgatcctctcagaccccgtctcgatcagatccgtaag
caggctgatgatcacaaatcccttgtgcttgcttacgcttcctacgcccgcaagctcaag
cttgaaaactccaagcttgttcgtgtttttgctgatctctcccgtaattatacctatctc
ctttccagccctgcttaccaaccgctgcacagctccgactctagttccattgacgaatca
cttctcaggcagtttgagaaggaggtcaaggagcgtattaagctcaccagacaggtcatc
accgaggccaaagagtcttttgataatcaactcaaaattcagaagttaaaagataccatc
tttgctcagaatgagcagttgactaaggctaagaagcaaggggctttttccagtttgatt
gctgctaaatccatccccaagagcttgcattgtgttacgatgaggctcatggaagagagg
attgccaatccggataagtattctgatgaggggaaggaaactccgcctgtaattgaagat
ccaaacctatatcactatgcaattttctctgataatgtgattgcagcttcggtggtggtg
aattcggctgtgaagaatgcgaaagatcctagtcagcatgtttttcatgttgtcactgat
aaaatgaatctcggagctatgcaagttatgtttaagatgagggattacaatggcgcccat
gttgaggtcaaggcagttgaagactacaaattcttgaactcttcttatgttccggttctt
cgccagcttgaatctgcaaatctgctcaagttctattttgagaacaaactcgagaatgcc
accaaagacacaaccaatatgaagtttaggaacccaaagtatttgtctatattgaatcat
atcaggttttatctgcctgaattgtacccgaagctgcataggattttgtttttggatgat
gatattattgtccagaaggatttgaccggactttggaagatagatatggacgggaaggtg
aacggagctgttgagacgtgctttgggtcttttcatcggtatgcacaatacatgaatttt
tctcatccactgatcaaacagaatttcagcccaaaggcatgtgcgtgggcttatgggatg
aacttctttgatctggatgcttggaggaaagagaagtgcactgagcagtaccattactgg
cagaatctgaatgaaaaccggaccttgtggaaattggggacgttgccaccaggcctgatc
acattctactcaacaaccaagccactagacaaatcttggcatgtgttgggtcttgggtac
aacccaagcataaacatggaagagattcgaaatgctgcagtggttcactttaacgggaac
atgaaaccatggcttgatattgccatgaaccagtttcgctcaatatggacaaagtatgtt
gattatgataatgagttcatacaggactgcaatttcggtctataa
DBGET
integrated database retrieval system
