Daucus carota (carrot): 108205029
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Entry
108205029 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108205029 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108205029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108205029
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
GTPases
108205029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
GTP_EFTU_D2
EF-G_D2
SRPRB
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
108205029
NCBI-ProteinID:
XP_017230265
UniProt:
A0A166G3G6
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All DBs
Position
1:complement(11373917..11377389)
Genome browser
AA seq
1035 aa
AA seq
DB search
MSNIRNICILAHVDHGKTTLADHLIASCGGGVLHPKQAGRLRFLDYLDEEQRRAITMKSS
SIALQFHNHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQAWIE
KLTPCLVLNKIDRLICELKLTPMEAFIRLQRIVHEVNGIMSTYKSQKYLSDVDSLLAAPS
GDLTDDNFELIEDDEEDTFQPQKGNVAFVCAFDGWGFRTSKFAEFCADKLNSKNPNPLHK
VNPATVNKALWGPRYYNPKTMMFVGKKGIAGISNAQPLFVQWVLEPIWQLYKACLEPDGD
IAILQKVIRNFGLKGLEHELKNKDPKSKLQAVMCHWLPLSDAILSMVVNCMPDPIQAQSF
RVSRLLPKREVLDEGMKSEVLAEAEAARKSVEACDSRPEAPCVAFVSKMFAVPVKMLPQR
GLHGEIINNFTEDGGNGDSDECFLAFARIFSGVLYAGQKVYVLSALYDPLKEENMQKHVQ
EAELHSLYLMMGQGLKPVAFVKAGNVVAIRGLGQHILKSATLSSTKSCWPFSSMVFQVSP
TLKVAIEPSDPADIGALMKGLRLLNRADPFVEVTVSGRGEHVLAAAGEVHLERCIKDLKE
RFAKVSLEVSPPLVSFRETIECEESDPLENLRLLTGTTDFVEKTTANGRCVVRVQVMKLP
TALTKLLDESSEFLGDIVGGKMGKTYNSLEAHKASITEDDNTIESLKKRIIAAVEKDSLY
WSSQIDKDLVEKYKVLWQNFLKRIWAFGPRQVGPNILLTPDIKKAANVDSSVLLRGSPYV
SQRLGFLDVEESQRIRKYEASMATTNGLYQEVETLESSVMSGFQLASAAGPLCDEPMWGL
AFVVEAYVSASTGQINDSSNSQQQAEQYGMFSGQVMTAVKDACKAAVLQKKPRLVEGMYF
CELNTPTEYLGAMYAVLARRRARVLKEEMQEGSPLFTVHAYLPVTESFGFADELRRWTSG
ASSALLVLSHWEALPEDPFFVPKTEEEKEEFGDGASVLPNTARKLIDGVRRRKGLPVEEK
VVQHATKQRTLARKV
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatattaggaatatttgcattcttgctcatgtcgatcatggcaagactactctt
gctgatcacctaattgcctcctgtggcggtggcgtgttgcaccccaagcaagcgggtagg
cttcgttttttggattatttggatgaggagcaaaggcgggctattactatgaagagctct
tctattgctttacaatttcataaccattctattaatcttattgactctcctggtcatatg
gatttttgtagtgaggtttctaccgctgcacgcttgagtgatggggctttggttttagtt
gatgccgttgagggtgttcatattcagactcatgctgtcttgcgtcaagcttggattgaa
aagcttactccttgtttggttttgaataagattgatagattgatttgtgaattgaaattg
actcctatggaggcctttattaggttgcagaggattgttcatgaggttaatggaataatg
agtacttataagtctcagaagtatttgtctgatgttgattctcttcttgctgccccgtca
ggggacttgactgatgacaattttgagttgattgaggatgatgaggaagataccttccag
ccacaaaagggtaatgtcgcctttgtgtgtgcgtttgatggatggggatttcgtacttca
aagtttgctgaattttgtgcggataaactgaatagtaagaatcccaacccactgcataag
gtgaatcctgccacagtcaacaaggccttatggggtcctcgctattacaatcctaagact
atgatgtttgtgggtaagaaggggatagctgggataagcaatgctcaaccgctgtttgtg
cagtgggtactagagccaatttggcagctttacaaggcatgtttagaaccagatggagac
atagctatacttcaaaaggtcatcagaaattttggcttgaaaggattggaacatgaactt
aagaataaggacccaaaatccaagctacaagctgtcatgtgtcattggcttccattatca
gatgctattttgtcaatggttgttaactgtatgccagaccctatacaggcgcagtctttt
cgggtatcccgtttgcttccaaagcgtgaagttttagatgagggtatgaagtccgaggta
cttgctgaggcagaggctgcaagaaaatctgttgaggcttgtgattcaaggccggaagca
ccatgtgttgcttttgtgtctaagatgtttgcagttccagtaaagatgcttccccagaga
ggcctacatggggaaataatcaataattttacagaagatggtggaaatggagattcagat
gagtgttttcttgcctttgccaggatattcagcggggtcctttatgctggacagaaggta
tatgtgctttcagctctctatgatccattgaaggaggaaaatatgcaaaagcatgtgcag
gaagctgagttgcactccctgtatttaatgatgggtcaaggtctgaagccggttgccttt
gtaaaggctggtaatgtcgttgccattcgaggccttgggcagcatatactaaagagtgca
acactttcatcaacaaagagctgttggcctttctctagtatggttttccaagtttctcca
actctcaaagtggcaattgaaccttctgatccagccgatataggagcccttatgaaaggc
ttgaggctcctaaaccgtgctgacccttttgtcgaggttactgtttctggaagaggggag
catgtgcttgctgctgcaggtgaagttcatctcgaaagatgcataaaggatttgaaggag
agatttgcaaaggtaagcttggaagtctctccacctcttgtgtcctttagagagacaatt
gaatgtgaggaatccgatccactagagaatctaaggttgttaaccgggactacggacttt
gtggagaaaaccacagccaatggaaggtgtgtcgtccgcgtgcaggttatgaagcttcct
actgccctgactaagttgctcgatgagagttctgaatttcttggagatattgtggggggg
aaaatgggaaagacctataatagtttggaggctcataaagctagcatcacagaagatgat
aatactatcgaatcacttaaaaagcgcataatagctgctgttgaaaaagatagtttatat
tggagctctcaaattgacaaggatttggtagaaaaatataaagtgttgtggcagaatttt
ctgaaaaggatatgggcatttgggccgagacaggttggtcctaacatcctcctcaccccc
gacataaaaaaagctgccaatgttgattcttctgttcttctccggggttcaccttatgta
tctcagagattggggttcctggatgtagaagaaagccaaaggattagaaaatatgaggcg
tcaatggctacaacaaatggattgtaccaagaagttgagactctcgagagcagtgttatg
tctgggtttcaacttgcgtcagcagctggtcctttgtgtgatgaacctatgtgggggttg
gcatttgttgttgaggcttacgtttccgcatcaactgggcaaataaatgactcctcaaac
tctcaacaacaagcagagcaatatggcatgttcagtggacaagtaatgacagctgtcaag
gacgcatgcaaagcggccgtactccagaagaaaccccggcttgttgaaggcatgtacttt
tgtgaattaaatactccaacagaatatttaggtgctatgtatgcagttcttgcacgtagg
cgagcccgagtactgaaggaagaaatgcaggaagggtctcctttgttcacggttcatgct
tatttgccagttacagagagctttgggtttgctgatgaattaaggagatggacatcagga
gcttcaagtgctttacttgttcttagtcattgggaagcacttccggaggatccttttttt
gtacctaaaactgaagaagaaaaggaagaatttggggatggtgctagtgtactgcccaat
actgctaggaaactgattgatggtgtaaggcggagaaagggcctccctgtggaggagaaa
gttgtccagcacgcaacaaagcagagaacactggctcggaaggtgtaa
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