Daucus carota (carrot): 108205050
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Entry
108205050 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108205050 isoform X1
KO
K17925
sorting nexin-13
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
108205050
Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108205050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
DUF1678
Motif
Other DBs
NCBI-GeneID:
108205050
NCBI-ProteinID:
XP_017230305
UniProt:
A0AAF0W625
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All DBs
Position
1:complement(24011606..24024594)
Genome browser
AA seq
1044 aa
AA seq
DB search
MKGMESLQDLIEEVKLRTVWWALCIFAVSYFLTHTSKSMWMNIPISVLMVSGLRILLNEI
DFHWKVRNIQQKTYLSHLEKKQLSVNDSELPALPTPPKRKKKIDSPIIEAAMEEFIDKLL
QDFVVDLWYSEITPDKEAPELIRAVVMDVLADVSGRVKEINLVELLTRDVVDLVGDHIDL
FRKNQTAIGIDIMQTLSSEERDERLKQQLRASKDLHPALKSPDCEYKALQRLMGGVLAVA
LKPREAKSPLIRCIARELLTCLVMQPLLNLASPKYINELIEYIYLAIKDYGFEQAGDGSP
VAEGHMRDHVLADSQQHSSESMSINGAPCNQGTNFSFSKCDNAKELSVAGSGTRHEESVQ
HISAEWARPLDAASQRRTEVLMPENLENMWTKGRNYQNKVKKGPNTGIQAAKSLEVNSVV
LLKDNERGSLAHKPEFSTKNQAKASGQTPSGHLPDFRLYSQKENPEDLSWEPGRVASFIG
GCSVDEFSDALVATGNRSKMKKSNSTSDLVILPDRGADVSSKIGGPIISEFYSPDSGGHN
QVVTVNSASLMVLSSEPHAPKLKCRVIGAYFEKVGSKSFAVYSIAVTDNENNTWFVKRRY
RNFERLHRHLKDIPNYTLNLPPKRIFSSSTEDTFVHRRCIQLDKYLQDLLSIANVAEQHE
VWDFLSVSSKNYSFGKSPSVMRTLAVNVDDAVDDIVRQFKGVSDGLMRKVSGSSSATYEQ
SSSNYGRNLSLKEDEIEKLILRQHTADSANHFSDDEEGEKEDASYSGERSFADTDQWHSD
NESDSREFLSMMEEHDEKLKSDVDKHNSKLQSKSTSTSGFPRANVPATSAHLEDLSGVPQ
EWVPPNLCVPVLNLVDNIFELKKRGWLRRQVFWISKQVLQLVMEDAIDDWILRQIHWIRR
EDIIAQGIHWVQDVLWPGGAFFLPLNSKSKIDNFERDEGSLRSTTHSARSTASEAGSFEE
QLESARRASDVKKILFNGAPAALVGLIGHNQYKRCAQDIYFFLQSSICLKQLTYGILELV
LLSIFPELREIILDMHEKTNDESV
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggatggagagtttgcaggatctgatagaagaagtaaagcttcgaactgtgtgg
tgggccctttgtatttttgctgtttcttacttcttaacacatacaagtaaatcaatgtgg
atgaatatccctatatctgttcttatggtctctggtttacgaatcttattaaacgagata
gatttccattggaaggttcgaaatatccaacaaaaaacatatctatcccacttagaaaag
aagcagttatctgttaatgattccgagcttcctgccttgccaacccctcctaaacggaag
aaaaaaattgattctcccataatagaggctgcaatggaggagtttattgacaaacttctg
caggattttgtcgtagatttgtggtattcagaaataacacctgataaagaggcccctgaa
ctgatacgcgcagttgtcatggatgttcttgctgatgtatctggtcgagtcaaagagata
aacttggttgaactattgacaagggatgttgtggaccttgtaggggaccatatagatctc
tttagaaaaaatcaaactgctattggcattgatatcatgcaaactttgtcatctgaggaa
cgcgatgagagattgaagcagcaacttagggcctctaaggaccttcacccggccttgaag
tctccagattgtgagtacaaggctcttcaacgccttatgggtggagtcttagctgtagca
cttaagccacgggaagctaaaagccccctcatccggtgcattgctcgggagcttttaaca
tgtttggtgatgcaaccacttttaaatttagcaagccccaagtatatcaacgaattgatt
gaatacatataccttgctattaaagattatggttttgaacaggcaggtgatggttcacct
gttgcagaaggtcatatgcgtgatcatgttcttgcagactctcaacaacatagctcagag
tccatgagtattaatggagctccatgcaatcaagggactaatttttcattttcaaagtgc
gacaatgcaaaagaattatcagtggcgggttcaggcacccgtcatgaagagtctgtgcag
catatatctgccgaatgggctcgacctcttgatgcagcaagtcagcgcaggacagaagtt
cttatgcctgaaaatcttgaaaacatgtggacaaaaggaagaaattatcagaacaaggtc
aagaaaggccctaatactggaatccaggctgcaaagagtttagaagttaatagtgtcgta
ctattaaaagataacgaaagaggatcactcgctcacaaaccagaattttctacaaaaaac
caagctaaagcttcaggtcaaacaccatctggccatcttccagattttcgtctatatagt
cagaaggaaaatccagaggatctttcttgggaaccaggcagggttgcatcttttataggt
ggttgcagtgttgatgaatttagtgatgcccttgttgccaccggaaacaggagtaagatg
aaaaaatcaaatagcacttctgatttggttattttaccagataggggtgctgatgtttca
agcaaaattggcggaccaatcatatcagagttctacagtcctgattcgggtgggcataat
caagtagttactgttaatagcgcttcccttatggtgttatctagtgagccacatgcaccc
aagcttaagtgccgggttataggagcatatttcgagaaagttgggtcaaaatcttttgct
gtttattcaattgctgtgacggataatgaaaacaacacttggtttgttaagcggagatat
agaaactttgaaagattgcatcgccatctcaaggacattcctaattatactctgaatttg
cctcccaaaagaatcttctcttcgagcactgaggacacttttgtgcatcgacgctgcatt
cagcttgacaagtatttgcaagatctactgtcgatagctaatgtagcagagcaacatgaa
gtgtgggatttcttaagtgtttcatcaaagaattattcttttggaaagtctccttctgtg
atgcgaaccttggcagttaatgtggatgatgcggtagatgacattgtacgccagttcaaa
ggggtatcagatggtctaatgcgaaaagtttctggttcatcttctgcaacatacgaacaa
tcttcttcaaattatggcaggaacttatccctgaaagaagatgaaatagaaaaattgatt
ttgagacaacatactgcagattcagctaaccatttctccgatgacgaggaaggcgaaaaa
gaagatgcaagctatagcggtgagagatcttttgcggatactgaccaatggcattcagac
aatgaatcggattcgagggaattcttgtcaatgatggaagaacatgatgaaaagcttaaa
tctgatgttgataaacacaattccaagcttcagtccaaatcaacaagcactagtggtttt
cctagagctaatgttccagcaacttctgcccatctggaagatttaagcggggtcccacaa
gagtgggtgccaccaaatctatgcgtacctgtgttgaatttagtagataacatctttgag
ctgaagaaaagaggctggctcagaagacaggtcttttggatttcaaagcaggtactacag
ttggtaatggaagacgctattgatgattggatcctaaggcagattcattggatccgaaga
gaggacattattgcccaaggaattcactgggttcaagatgttctctggcctggtggtgct
tttttcctgcccttgaatagtaaaagtaagatagataattttgaacgagatgagggtagt
ttacggagtacaactcattcggccagaagtacggcctctgaagcagggtcttttgaagag
cagcttgagtctgctcggagagccagtgatgtcaagaaaattttattcaatggagctccc
gctgctctagttggcttgattgggcacaatcagtacaagcgatgtgctcaagacatatat
ttcttcctgcagtccagtatttgtttgaaacaactcacgtatggaatactcgaacttgta
ctcctgtccattttcccggagctgcgggaaattattttggatatgcatgagaagacaaat
gatgaatctgtatag
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