Daucus carota (carrot): 108205095
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Entry
108205095 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108205095
04120 Ubiquitin mediated proteolysis
108205095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108205095
04131 Membrane trafficking [BR:
dcr04131
]
108205095
04121 Ubiquitin system [BR:
dcr04121
]
108205095
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108205095
Chaperones and folding catalysts [BR:
dcr03110
]
Other chaperones and cochaperones
Others
108205095
Membrane trafficking [BR:
dcr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108205095
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
U-box type E3
108205095
Multi subunit type E3
STUB1-CHIC2 complex
108205095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_16
ANAPC3
zf-NOSIP
TPR_12
TPR_9
TPR_BSK1_C
zf-Nse
TPR_19
Motif
Other DBs
NCBI-GeneID:
108205095
NCBI-ProteinID:
XP_017230375
UniProt:
A0AAF0WAR5
LinkDB
All DBs
Position
1:complement(55889020..55893985)
Genome browser
AA seq
280 aa
AA seq
DB search
MGHSVSTTSAQRAEKLRQDGNLYFSKLKFAAAIDAYTEAITLCPNVPVYWSNRALCHRKR
NDWDKVEEDCRRVVQLDRTSVKGHYMLGLALLQKKEYAEGVKELEKALDLGRGADPKGYM
VEEIWQELAKARYLEWEQESTMRAWELQNLKEACETALKEKHERDLSNTGGLVNHSNSVY
PEQLKALKNVIDKAIEDDNQTEVPDYLCCKITLDIYRDPVITPSGITYERSAIFEHLNKV
GKFDPITRELLNQSQLVPNLAVKEAVNAFLRKNGWAYKMY
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggggcacagcgtgtcgactacatcggcccaacgggccgagaagctccgtcaagacggc
aatctctacttctccaagctcaaattcgccgccgctattgatgcctatactgaggctatt
actctgtgccctaatgttcctgtttattggagtaatcgtgctctttgtcatcgcaagcgc
aatgattgggacaaggtcgaagaggattgtaggcgagttgttcagcttgatcgtacttct
gtcaagggtcattatatgttgggtcttgcattactacagaagaaagagtatgcagaaggg
gtcaaggaactggaaaaagctctggatctgggcagaggtgcagatcctaagggatacatg
gttgaagaaatatggcaagagcttgccaaagcaagataccttgagtgggagcaagaatct
accatgagagcatgggagctacaaaacttgaaagaagcttgtgagactgctctcaaggag
aaacatgagcgggatctttctaataccggagggcttgttaatcattctaatagtgtctat
ccagagcagctaaaggctctgaagaatgtaattgacaaagctattgaagatgacaaccaa
actgaggtgccggactatttgtgctgtaaaattacactcgacatctatcgtgaccctgtc
attactcctagtggaatcacctatgaacgttcagcaatttttgagcatctcaacaaggtg
ggaaaatttgatccaatcacacgtgaattgcttaatcagtcccagctggttccaaatctg
gctgtaaaggaagcagtaaatgcatttttgcgaaaaaatggctgggcgtataagatgtac
tga
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