Daucus carota (carrot): 108205192
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Entry
108205192 CDS
T05350
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108205192
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
108205192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Occludin_ELL
MCPsignal
DUF1759
V-SNARE
DUF948
GCIP_C
ING
MtrG
FUSC
DUF2203
JHD
Motif
Other DBs
NCBI-GeneID:
108205192
NCBI-ProteinID:
XP_017230521
UniProt:
A0A166J6X4
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All DBs
Position
1:53738657..53743859
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AA seq
261 aa
AA seq
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MASLSAISEELAQLDGQVTDIFRALSNGFQKLEKMKDSNRKSRQLEELTDKMRDCKRLIK
EFDREVKDMEYSNDAATNRMLNEKKQSMVKELNSYVALKKQYASNLDNQRADLFQAPDEA
SRDDNSLMASSMTNQQLMDNGNQMMDETDQAIERSKKVVHETVNVGTETAAALKAQTEQM
GRIVNELDSIHFSIKKASKLVKEIGRQVATDRCIMGLLFLIVIGVIAVIIVKLVNPNNKD
IRDIPGLAPPASTNRKLLWQN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttgtctgcaatcagtgaggagctagctcaactcgacggtcaagtcaccgat
atttttcgagcattatcgaatggatttcagaagttggagaagatgaaggactcgaatcgg
aagagtaggcagttggaggagcttacggataagatgcgcgattgtaagaggcttattaaa
gaattcgacagagaagttaaggatatggaatatagcaatgatgcagctacgaataggatg
ctaaatgagaaaaaacagtcaatggtgaaggagttaaattcatacgttgctctcaaaaag
cagtatgccagcaatcttgacaaccagcgagctgatctctttcaggctcctgatgaagct
tctagggacgataatagcctaatggcttcatctatgacaaatcaacaactaatggacaat
ggcaaccaaatgatggacgagacagatcaagcaattgagaggtccaaaaaggttgtccac
gaaactgtaaatgtcggtacagagactgctgcagctttgaaggcacagactgaacaaatg
ggtaggatagttaatgagctggattccatccacttctccattaagaaggcttctaagctg
gtcaaggaaattggtaggcaggttgcaactgatcgctgtattatgggtttgctcttcctc
attgttatcggtgttatagcggtcatcattgtgaagcttgtgaacccaaataacaaagac
atccgagacatccccggactagctcctccagcttctactaatagaaaactgctctggcaa
aattag
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