Daucus carota (carrot): 108205198
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Entry
108205198 CDS
T05350
Name
(RefSeq) eukaryotic initiation factor 4A-15-like isoform X1
KO
K03257
translation initiation factor 4A
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108205198
03012 Translation factors [BR:
dcr03012
]
108205198
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108205198
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108205198
mRNA cycle factors
Stress granule specific factors
108205198
Translation factors [BR:
dcr03012
]
Eukaryotic type
Initiation factors
eIF-4
108205198
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108205198
Exosomal proteins of bladder cancer cells
108205198
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Retrotran_gag_2
DUF4219
ResIII
Retrotrans_gag
AAA_22
Motif
Other DBs
NCBI-GeneID:
108205198
NCBI-ProteinID:
XP_017230531
LinkDB
All DBs
Position
1:complement(3868629..3872742)
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AA seq
652 aa
AA seq
DB search
MLHLRSFIVTVEDTSMNYSLCSRGAMDSFDLMTLNQSNYKIWRSCMESYLASEDLWDIVC
GAHGISLQNTRVNDDALKDWKKKNGRAEFVLKRSISDELFHHILYCKSASSIWETLTSVF
NKTDKENSLRVLENELENARQGTLSISQFFLKIKNLCSEISKLTPDEPVSDARLKCIVDH
GLKPEFVPFVKSIQGWPVQPSFEEYENILVSLEGLAKKSAEITSKNERESDLNARKPKNN
KDKVMAGCVPEASCFNTSMTELSRLAADGEKFFTTCDEVYDSFDAMGLDENLLRGIYAFG
FEKPSAIQQLGIVPFCKGLDVIQQAESGIGKSVIFCSGVLQQLDYDVVECQALVLAPTRE
LAQQIEMVMQALGGHLGVRVLSCGWNSARNDQRILSRGFHVVVGSPSRVLHLLRKQSLCS
DHIKMLVLDEVDKIPSLDFKEINDIRQLLPPKIQVGIFSATTIPPEALEITGKFMNKPVR
ILVKRDGLNLEGIKQFYVNVDKEERKLETLCDHYETLVIFQSVIFVNTECKVDWLTDKMR
SRDYTVSATHGDMDQNTRDFIMHEFHSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYVHRIGCIGRFGRKGFAINFVTKDDVRMLVDIQKFYNVVVDELPATFADL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcttcgctcattcattgttaccgttgaagatacttctatgaactatagtttg
tgctctagaggtgcaatggattcatttgatctaatgactctaaaccagtccaactacaaa
atctggagaagttgtatggagtcctatcttgctagtgaagatttgtgggatattgtgtgt
ggagcacatggtatttctttgcaaaatacccgagtgaatgatgatgctctcaaagattgg
aagaaaaagaacggcagagctgaatttgtcttaaagagatccatctctgatgaactcttt
catcatattctctattgcaagtcagcaagtagtatctgggaaactctgactagtgtattc
aataaaactgacaaggaaaattcactaagggtgttagagaatgagcttgaaaatgccaga
caaggtactttgtctatttcacagtttttcttgaaaatcaagaacctgtgctcagagatt
tctaaacttaccccagatgagccggtttctgacgcccggctgaagtgcatagttgatcat
ggcttgaagcccgaattcgttccctttgtgaaatcaatccaaggatggcctgtacaacca
tcttttgaagaatatgagaatatattggtttcactggagggcttagcaaagaaaagtgca
gaaattacgtctaagaatgaaagggaaagcgatttgaatgcaagaaagcctaaaaataat
aaagacaaagtcatggctggttgtgtaccagaagcttcttgcttcaatacaagtatgact
gagctgagcagacttgctgctgacggagaaaaattctttacaacatgtgatgaggtttat
gacagctttgatgcaatgggattggacgaaaatcttttgagaggcatatatgcatttggt
ttcgagaagccatctgcgattcagcagctcgggattgttccattctgcaagggactagat
gttattcaacaggcagagtctggtatcggaaaatctgtaattttttgctctggagttttg
cagcaacttgattatgatgttgtagagtgtcaagcactggttcttgctcctacacgtgaa
ctcgcacaacaaattgagatggttatgcaagctcttggtggtcatcttggcgtaagggtt
ctttcctgtgggtggaatagtgcccgtaatgatcaacgtattctgtcaagaggttttcat
gttgtggttggttctccgagccgtgtattacacctgttgcggaaacagtctctttgttca
gatcacattaaaatgcttgttttggacgaagtggataaaattccgtcgttagacttcaaa
gagattaatgatatccggcagttgctaccacctaaaattcaagttggaattttctcggcc
accaccatacctcctgaggctcttgaaatcacaggaaaattcatgaataagcctgtgaga
attctggtaaagagagatgggctcaatcttgagggtatcaaacaattttatgttaatgtt
gacaaggaggaacggaaactggaaacactttgtgatcattatgagaccttggttattttt
cagagtgtcatctttgttaatactgagtgcaaggttgattggctgactgacaaaatgcgc
agccgtgattacacagtctctgctactcatggagacatggatcaaaacactagagatttt
attatgcatgaatttcattctggttcttctcgtgtgctcattaccaccgatcttctggct
cgtggtatagatgtccaacaagtatcccttgtaattaactatgatttgccgactcagcca
gagaactacgttcatcgaattggctgtattggacgttttggaaggaaaggttttgcaatc
aactttgtgaccaaggatgatgtcaggatgttggttgacatacagaagttctacaatgta
gtagtggacgagctgccagccacttttgccgatctttag
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