Daucus carota (carrot): 108205214
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Entry
108205214 CDS
T05350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Q isoform X1
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108205214
Spliceosome [BR:
dcr03041
]
Complex C
Other components
hnRNP proteins
108205214
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_7
BRAP2
PHM7_cyt
RRM_3
RRM_PARP14_3
RRM_YTH1
TARSH_C
RRM_DEAH11
Spo7_2_N
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
108205214
NCBI-ProteinID:
XP_017230559
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All DBs
Position
1:40109817..40116286
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AA seq
476 aa
AA seq
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MADGAEVEDRVDFDDDNYEEMDDDVEEQLEDEGGDDVQDEQDDLKSQNSGKESPEDDKSR
SSNNANESIEDEEKPSAPVDDEDTQKHVELLALPPHGSEVFIGALPRDITEEDLRDLCDS
VGDIVEIRLMKNKDTGESKGFAFVSFKTKDVAQKAIEQLHSKEYKGRTLRCSLSETKYRL
FIGNVPKNLTDDEFKKLIDEVGPGAEHIELIKDPQVPSRNRGFAFVEYFNNSCADYSRQK
MSSADFKLEGNTPTVTWADPKSTPDHSSSAQVKALYVKNIPENTPSEQLKELFERHGEVK
KVVMPPSKSGGKGDFGFIHFAERSSALKAVNDAEKYEINGQVLEVVLAKPQSDRKPDGAN
IHNSGLVPNYIPSPGYGGFPGNPYAAPVGAGYGVAAGYQQQPMIYGRGPMPAGMQMVPMV
LPDGRIGYVLQQPGVQMPQMPARRNDRTNGTGGPQGRGRPGGANDAANRGRRYRPY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtgcagaagttgaggaccgtgtggattttgatgacgacaattatgaagag
atggatgatgatgttgaggaacagttggaggatgaaggaggtgatgatgtacaggatgaa
caagacgatttgaaaagtcaaaattctgggaaggagtcccctgaagatgacaaaagccgt
tcaagcaacaatgcgaatgaatctattgaagatgaagaaaagccttctgcacctgtggat
gatgaggacacgcaaaagcatgtggaacttcttgctcttcctcctcatggttctgaggtt
tttattggtgctcttcccagagatattacggaagaagacttgcgagatctttgcgattct
gtgggtgatatcgttgagataaggttgatgaaaaataaagacactggtgaaagtaaaggt
tttgcttttgtgtcattcaagacaaaggatgttgcccagaaggcaattgaacagttgcat
agtaaagagtataagggtagaactttgaggtgctctctgtctgaaactaaatacagactg
tttattggcaatgttccaaagaacttgactgatgatgagtttaaaaaattaattgatgag
gttgggccaggggcagagcacattgagcttatcaaggatcctcaagttccaagccgtaat
agaggttttgcttttgttgagtatttcaacaattcatgtgctgattattcgagacagaaa
atgtcaagtgctgattttaaactggaaggaaacactccaacagtaacttgggctgatccc
aagagtacacctgatcattcttcttctgctcaggtcaaggctctttatgtgaagaacata
cctgagaacacaccatctgagcaattaaaggaactctttgagcgccatggtgaagttaaa
aaagttgtcatgcctccttccaaaagtggcggcaaaggagattttgggtttattcatttt
gcagaaaggtcaagtgcattgaaagctgtcaacgatgcagagaaatatgaaattaatggt
caggtgttggaagtggtccttgcaaagccccaaagtgataggaagcctgacggtgcaaat
atccacaattctgggctcgttccaaattatattcccagccctgggtatggtggcttccct
ggtaacccatatgctgctcctgtcggggcaggatatggtgttgcggcaggatatcagcag
cagcctatgatttacgggagggggccaatgccagcaggaatgcagatggtgccaatggtt
ctaccagatggccggattggctatgttcttcagcagcctggtgtacagatgccacaaatg
ccggcccggagaaatgaccggaccaatggaacaggtggacctcaagggcgaggacgacct
ggtggtgccaatgatgctgccaatcggggtcgacgatatcgtccctattag
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