Daucus carota (carrot): 108205216
Help
Entry
108205216 CDS
T05350
Name
(RefSeq) isoamylase 2, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00500
Starch and sucrose metabolism
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108205216
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
108205216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
DUF3889
Motif
Other DBs
NCBI-GeneID:
108205216
NCBI-ProteinID:
XP_017230565
UniProt:
A0AAF0W7P5
LinkDB
All DBs
Position
1:38142618..38146152
Genome browser
AA seq
861 aa
AA seq
DB search
MATFPVSSIVGSNVFFSRATDLSNLVFAGHMISKKIVAQSAGKKDGQRNLVFQGVAMSAA
NRSYHEHRQNVLITSQSFVLHTPEKVWKYLFRTETGDLVKVWIEMKNNNYSVFVEVSSPQ
LLDGNGDLLMVWGMYRSDSSSFMTMDHQSSSVTSPQNTTETPLLLKSSGKIAVELNLEAN
LAPFYLSFKLKFRSSDGLRISEIRSHRNTNFCVPVGFSSGYPAPLGLSFSTDGSMNFSLF
SRSAERVVLCLYDTSMNAEPALEIDLDPYVNRTGDIWHASINSAIPLLSYGYKCQAGTKQ
KKDTVLLDPYAKIIGNNSSSLLPRYLGQLQKEPNFDWTGDIRPFLPLEKLVVYRLNVLCF
TKDQSSELPDDIAGTFTGISQKLQHFKDLGVNTILLEPFFPFNDQQGPYYPFHLFSPANI
YGHSKSPISNIKSVKEMVKTLHANGIEVFMEVVFTHTADTESLKDIDNSSYHYVREYDGI
HQNTLNCNFPVVQQLILDSLRHWVIEFHIDGFCFINAASLLRGCNGETLFRPPLVEAIAF
DPILSNVKIIADCWDPHDAEPKAVRFPHWKRWAEVNTRFCEDVRNYLRGENLLSNLATRL
CGSGDNFSAGRGPAFSFNFISRNSGLSLVDLVSFSASELASELSWNCGVEGATTNPDILE
TRLKQVRNFLFILFVSLGVPVLNMGDECGQSSGGSPAYADRKPFNWDSLKTGFGIQTTEF
ISFLSSLRVRRSDLLQKKNFLKEENIEWHGIDLSPPSWEDSESKFLGMILKVYEEEIQST
SSAPSVNGNMFIAFNAADHSEDILLPPPPADMEWQRLVDTSLLYPGFFSLDGDPVFEQMP
ELVYEMKSHSCILFESRHTSG
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggctacatttccagtatcctctatagtaggatcaaatgtttttttcagtcgggccact
gatttgagtaatttggtttttgctggtcacatgatctctaagaaaatagtggcacaaagt
gcaggaaaaaaagatgggcagagaaatttagtttttcaaggagttgcaatgagtgcggca
aatagatcttatcatgaacacaggcaaaatgtgttgattacatcacaatcttttgttctt
cacactccagaaaaggtctggaaatatctatttaggacggaaactggtgatctggtaaag
gtgtggattgagatgaagaataataattacagtgtctttgtcgaagtttcatcaccacaa
cttttagatggaaatggcgatctgcttatggtttggggaatgtataggtctgattcatca
tcgttcatgactatggatcatcaaagttccagtgtaacttccccacaaaatactacagag
accccgctgttgctaaagtcttcagggaagattgcagttgagctaaatttagaagcaaat
ctagccccattttacctctcattcaaacttaagtttcgttcaagcgatggcttaagaata
tctgaaattagaagccacagaaatacaaacttttgtgtgccagtcggtttcagttcaggg
tatccagctcctttaggtctttccttctctactgatggttcaatgaacttctccttattt
tcacgaagcgcggaaagggttgttctgtgtttgtatgacacttcaatgaatgctgagcct
gctctagagattgatctagatccttatgtcaatcggacaggtgacatctggcatgcctcg
ataaatagtgcaattcctcttttaagctacggctataagtgtcaggctggtaccaagcaa
aaaaaagatactgtccttttagatccctatgctaaaatcattgggaacaatagttcaagt
ttgcttccacggtatcttggacaactgcagaaggaaccgaattttgattggactggtgat
attcgccccttcttacctttagagaagcttgtggtctatcgattaaatgttctgtgtttc
actaaagatcaatcaagtgaattacctgatgacattgcaggtactttcactggtatctct
cagaagttgcagcattttaaagatcttggtgtcaatacaatcttattagaaccattcttc
ccttttaatgatcaacaaggaccctattatccctttcatctcttttctccagcaaatatt
tatggacattccaaaagtcctatatccaatataaagtcagttaaggagatggtaaagaca
ttacatgccaatggcatagaggtttttatggaagttgtttttacccataccgctgatact
gaatcacttaaagatatcgataattcatcatatcattatgtaagagaatatgatggtatt
caccaaaatactttaaattgtaattttcctgttgtccagcagttgattttggatagcctt
cgacattgggtaattgagtttcatattgatggcttctgtttcataaatgctgcttcatta
ttgagagggtgtaatggggagaccctcttccgcccccctttggtggaagcgattgcgttt
gatcccatactctcaaatgtcaagatcatagcagattgttgggatccacatgatgctgag
ccaaaggctgtacgttttccacactggaagaggtgggcagaagtgaatacaagattttgt
gaggatgtaagaaattatctgagaggtgagaatcttttaagtaaccttgcaactaggctt
tgtgggagtggagataatttttcggctggtcgaggcccagctttctccttcaattttatt
tccagaaattctggactctctcttgttgacttggtcagttttagtgccagtgagttggct
tcagagttaagttggaattgtggagtagaaggtgcaacaactaatcctgatatacttgaa
acacgacttaaacaagttcgaaattttctcttcattttgtttgtttccttaggagttcct
gtcctaaatatgggagatgaatgtggtcaatcttctggtggttctcctgcatatgcagac
agaaagccctttaattgggattctctaaaaactggcttcggcattcagaccacagagttt
atctctttcctgagttcactgagagtgcggagaagtgatcttcttcaaaagaagaacttc
ttaaaagaagagaatattgaatggcacgggattgatctgagtcctccaagttgggaggac
tcggaaagcaaattcttaggcatgatattgaaggtttatgaagaagaaattcagtcaacc
tcctccgcacctagtgtgaatggtaacatgtttattgcttttaatgccgcagatcattca
gaggacattcttttacccccacccccagctgacatggaatggcaacgtttggttgacaca
tctcttttatacccgggatttttctccttggatggtgatccagtatttgagcagatgcca
gaattagtatacgagatgaagtctcacagttgcatcttgttcgagtctagacacacaagt
ggttaa
DBGET
integrated database retrieval system
