Daucus carota (carrot): 108205244
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Entry
108205244 CDS
T05350
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108205244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108205244
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108205244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
CrtC
WSD
Motif
Other DBs
NCBI-GeneID:
108205244
NCBI-ProteinID:
XP_017230609
UniProt:
A0AAF0W790
LinkDB
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Position
1:44245413..44256060
Genome browser
AA seq
956 aa
AA seq
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MRTTRNQSKRQAESTGEEESKRPRLNAGKQTCVDDNDTLADISHEAVDNLLKRFNRRGSR
GSKLQESFLSRCDAINKLESGLKKKEKQTADETSSRNVTESSSSKAKAEDGIAQQATNDD
DQMDEPDWEEGPVNTISSRNDQEEGNITIEFEASPDTAKRKTICRASAEDKERAELVHKA
HLLCLLGRGRLIDRACNDPLIQAALLSLVPRQFLKISETSKLTARALAPLVNWFHKYFHI
RLRNDKERSFESALALALETQEGTGEEIAALSVALFRALNLTTRFVSVLDVASLKPCVEK
NESVNKKATRTSRGIFNSPTLMVPTADLVSGFPSRQFALADMDNVCETSGRHSFKNKIRK
TESSTSQVRGSPPADQLNDYEAQNNMSDSGFTQFKLPKRIGDLEFEMQLEMAKAATASGH
DTIDRESSQTNFHFRSLSMSYRGTRRVRSEESPASHGFSVAFGSRKVGAPLYWAEVYCSG
ENLTGKWVHIDAVNAIIDGEQKVEAAVSACKTSLRYAVAFAGDGAKDVTRRYCMKWYKIA
SERINMGWWDAVLAPLKELESAATENMLMRREGLNKHEKTKTTGMPGQSMLDCASGPEKS
LAECPVENSYGVSRSCLEDIELETRALTEPLPTNQQAYKTHPLYALERWLTKYQMLHPRG
PVLGYCSNHPVYPRTCVQVLRTKERWLREGLQLKPNEPPAKVLKRSPKQNKEQASEADEY
DEGDDCGRDTSLYGKWQTEPLQLPHAVNGIVPRNERGQVDVWSEKCLPPGTVHLRFPGLV
PIAKRLEIDFAPAMVGFEFRNGRSVPVYEGIVVCTEFKDSILEVYAKEVEKRDAEERRRN
ESQAISRWYQLLSSIVTRQRLKNRYGDGSASQSVAHTPNSNVEAGARVSNDKDAAKQTSK
SQPRDLHVGKEKARQPEITDEHEHVFVMDDQSTGDEESSTRIKRCHCGFYIEVEVL
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgcggacaacaagaaaccaaagcaagagacaagctgaatcaacaggtgaggaagaaagc
aaaaggcctcgacttaatgcgggaaagcaaacctgtgttgatgataatgacacccttgct
gacatatcacatgaggctgttgacaacctcctaaagagatttaatagacgaggttcgaga
gggtccaaattgcaagagagttttcttagtcgttgtgatgccataaacaagttggagagt
ggattgaagaagaaggaaaaacaaacagcggatgagactagtagtagaaatgtcactgaa
agcagttcatcaaaagcgaaggcagaagacggaattgctcagcaggctactaatgatgat
gatcagatggacgagcccgactgggaagaaggaccagttaacactatcagctccagaaat
gatcaagaagaaggcaatattacaattgaatttgaggcatcgcctgatacagcgaagcgg
aagactatctgtcgagcttctgctgaagataaggaacgagctgagcttgtgcataaagct
catcttctctgtttactaggacgaggaagattaattgatcgcgcctgtaatgatccttta
attcaggctgccttactttcactagtaccaagacagtttttgaagatatcagaaacctca
aaacttacagcaagagctctggctcctctggttaattggtttcataaatactttcacatc
agactccgaaacgataaggagagatcatttgaatcagctctagcattagctcttgagaca
caagaaggcactggagaggagattgctgctttgtctgtagcactttttagagctttgaat
ctcacaacccggtttgtttctgttctggatgttgcttccttaaaaccttgtgttgaaaaa
aatgaatccgtaaataagaaagctacacgtacaagtagggggatattcaactctccaaca
ttgatggtgcctactgcagatctagtctctggttttccttctagacagtttgctcttgct
gacatggataatgtatgtgaaacatctggtagacattctttcaaaaataaaatcagaaag
acagaaagtagcacatctcaagttagaggttctcctcctgctgaccagttgaatgattat
gaggcacagaataatatgtctgactctggttttacacaattcaagttgccaaaaaggata
ggtgatcttgagtttgaaatgcagctggaaatggccaaagctgcgacagcatctggacat
gatacaattgatagagagtcatctcaaacgaatttccattttcgctctcttagtatgtca
tatagaggaacgagaagagtcagaagtgaagaatccccagcttctcacggattttctgtt
gcctttggatccaggaaagtaggggctcctttgtactgggcagaagtatactgtagcggg
gagaacctgacaggcaaatgggttcatattgatgctgtcaatgctattattgacggggag
cagaaagtagaagctgcagtttctgcatgtaagacttctttgagatatgctgttgctttt
gcaggagatggagctaaagatgtgacacgcaggtattgtatgaagtggtacaagatagct
tcagagagaatcaatatgggatggtgggatgctgtgttagcaccattgaaagagttggag
tcggcagcaactgaaaatatgcttatgagacgggagggtttgaataagcatgagaagaca
aaaacaactggaatgcctggtcagtccatgcttgactgcgcatcaggccctgagaaatct
ctggcagagtgtcccgtagaaaattcatatggtgtttccaggagctgtcttgaagatata
gagttggaaactagggctttaactgagcctcttccgactaatcagcaggcgtataaaacc
catccattgtatgctcttgaaaggtggcttaccaagtatcagatgcttcaccccaggggt
cctgtattgggttattgttctaatcatcctgtttatcctcgaacttgtgttcaagttctc
cgtacaaaagaaagatggttgcgtgaagggctgcagctcaaacccaatgaacctccagca
aaggtgttgaagcgttcaccaaagcagaacaaagagcaagcttctgaagcagatgaatat
gatgagggagacgactgtggacgagatacttctctttatgggaagtggcaaacagaacca
ctgcaactgcctcatgctgtaaatggaattgtaccaaggaatgaacgcggccaagtggat
gtttggtctgaaaagtgtcttcccccaggaactgtgcacctgaggtttccaggtttggtc
cccattgcaaagagacttgaaatcgattttgcacctgctatggttggttttgagttccgg
aatggtcgctctgtccctgtgtatgaaggcattgtggtgtgtactgaatttaaggactca
attctggaggtgtatgcaaaagaagtggagaaaagggatgcagaagaaaggaggaggaat
gaatcacaagctatttctagatggtatcaactactttcatccattgtaactaggcaaagg
ttgaaaaatcgctatggtgatggctctgcttcacagtctgtagctcacacaccaaattcc
aatgtcgaagctggtgcacgtgtcagtaatgataaggatgctgccaagcaaacatccaag
tcccagccaagggatctgcatgtcgggaaagagaaagctcgacaaccagaaattactgat
gaacatgaacatgtatttgtgatggacgatcagtcgactggtgatgaagaaagttccaca
aggattaagcgttgtcactgtggattttacattgaagtggaggtgttatag
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