Daucus carota (carrot): 108205259
Help
Entry
108205259 CDS
T05350
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 4 isoform X1
KO
K19892
glucan endo-1,3-beta-glucosidase 4 [EC:
3.2.1.39
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00500
Starch and sucrose metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108205259
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dcr00537
]
108205259
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
108205259
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dcr00537
]
Enzymes
108205259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
108205259
NCBI-ProteinID:
XP_017230631
LinkDB
All DBs
Position
1:complement(29365441..29371991)
Genome browser
AA seq
501 aa
AA seq
DB search
MMLRIWTRCIILIICMLSGSLGGYVGINIGTDISNLPSASDVVDIIKANQITHVRLFDAD
AHMLTALSDTGIEVMVSVTNEEVLGIGESASVAAAWINKNVAAYLPSTNITAISVGSEVL
TSIPNAAPVLVPAMNYLHKALVASNLNYQIKVSAPQSMDLIPKPFPPSTATFNSSWNSTI
FQILQFLKNTNSYFMLNAYPYHGYIINDGIFPIDYALFRPMTSVKQIVDPNTLYHYDSMF
DAMVDATYNSIAAFNTSTIPVVVTESGWPWFGGADEPDATVDNAETYNNNLIHRVLNDSG
PPSQPAIPINAYIYELFNEDKRSGPVSKRNWGAFFPNGSSVYPLSLSTSDNNIGNASVGF
CVARQGADSNKLQSGVNWACGQGQANCTAIQSGQPCYLPNTLQNHASYAYNDYYQKMKSV
GGTCDFDGTAMTTKNDPSYGSCIFTGSSNSSSIGFTPPAFGPVSPVGQSSKLHIPVLGSF
LLTMFVTFLVVDVHIHIFCDC
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaggatatggacccgatgtatcattcttattatttgcatgttatctggctca
cttggtggatatgtaggaataaatattggaactgatatttccaatttaccctccgcatct
gacgtggttgacattattaaagccaatcagattactcatgtacgcctttttgatgctgac
gctcacatgctaactgctctgtcagacactggaattgaagttatggtcagtgtcactaat
gaggaggtactgggaattggtgaatccgcatcagtagcagcagcctggataaataaaaat
gtggcagcttacttgccatcaaccaatattacagccatttctgttgggagtgaagtactt
acttcgattcccaatgctgcccctgttttggttcctgccatgaattatcttcacaaagca
ttagttgcgtcaaatttgaactatcaaataaaagtttcagccccccaatcaatggacctt
atccccaagccttttcctccttccacagccacatttaattcatcgtggaactccacaatt
tttcagatacttcaatttttaaaaaacacaaactcctatttcatgttaaatgcttatcca
taccatggatacataatcaacgatggcatcttcccgattgattatgcactattccgacca
atgacatcagtgaagcaaatagttgacccaaatacgctttatcattatgatagcatgttt
gatgctatggtggatgccacctataactctatagcagcatttaatacttcaactattcct
gttgttgtaacagaatctgggtggccttggtttggtggcgctgatgagcctgatgctact
gtggacaatgcagaaacttataacaataatttgatccatcgtgttttaaatgattctggt
cctcccagtcagcccgccatccccatcaatgcctacatttatgagttgtttaatgaagac
aagagatcaggacccgtttcaaagagaaactggggtgcattctttcccaatgggagttct
gtatatccacttagtctgagtacttcagacaataatattggaaatgcttcagtaggtttt
tgtgtagcaaggcaaggggcagattccaataaactgcagagtggagttaattgggcttgt
ggacaaggccaggccaactgcactgcgattcaatcagggcaaccatgttatcttcctaac
actctacagaatcatgcttcctatgcttacaatgactattatcagaaaatgaaaagcgta
ggtggaacctgcgatttcgatggtactgccatgacaactaaaaatgatcccagttatgga
tcctgcatatttacaggaagttcaaactcaagctcaattggctttactccacctgcattt
ggacctgtgagccctgtgggacagagttcgaaacttcatattcctgtgcttggttctttt
cttttaacaatgtttgttactttcttagtggtagatgtgcatattcatatcttttgtgat
tgttaa
DBGET
integrated database retrieval system
