Daucus carota (carrot): 108205371
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Entry
108205371 CDS
T05350
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108205371
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108205371
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
108205371
NCBI-ProteinID:
XP_017230803
UniProt:
A0A166J9Z0
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All DBs
Position
1:complement(54478499..54482213)
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AA seq
357 aa
AA seq
DB search
MATGNPFDLLVDDDNDDVSQLLQKLPPPVKKAPVAEKVAPAAKLPVKPLPPAQAVRESRT
DGQRGGGRFGGRGTGRGRGGRFGRDFADNGNSYNNNNGGFSEGYRQPEQGDLDKSSERRA
YGGPRGGGGAPRGGRRGGYNNGEVTEGERPRRVYERHSGTARGNEFSKRDGAGRGNWGTP
TDDIAPVNEEPVNDGEKNAEAEKEPEQENTDDASKENPVTEPEEKEPEEMTLEEYEKVLE
EKRKALLALKSEERKVDLDKDFESMQLLSSKKNEEEIFVKLGTDKDKRKEAEKEEKAKKA
LSINEFLKPAEGEKYYGPGRGRGRGRGPRGGFGGNMGNNVRAPAIEDQGQFPTLGAK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggccactggtaatccgtttgatctgctcgttgatgatgacaacgacgacgtttcgcag
ctgcttcagaagctcccgccgccggtcaagaaagcaccggtagccgaaaaagtcgctccc
gcggctaagcttccggtcaagcctctacctcccgcccaggctgtgagggagtcaaggact
gatggtcagcgaggtggaggacggtttggtggtcgtgggactggccgtggtcgtggagga
aggtttggtcgagattttgctgataatgggaactcgtacaacaataacaacggtgggttt
tctgagggatacagacaacctgaacaaggtgacttagacaagtcttctgaaagacgagca
tatggtggtcctcgtgggggtggcggagctcctcgtggtggtcgccgcgggggttataac
aatggagaagttactgaaggtgaacgccctcgaagggtatatgaacgccatagtgggact
gcccgcggaaatgagttcagtaagcgtgatggtgctggcagggggaactggggaactccc
actgatgacattgctccagtgaatgaagagcctgttaatgatggtgaaaagaatgctgaa
gctgaaaaagagccagagcaggaaaacactgatgatgccagcaaggagaaccctgtaact
gaaccagaagagaaggaacctgaggaaatgactctggaggagtatgagaaagtacttgag
gagaaaaggaaagcattgctggcacttaaatcagaagagagaaaggttgacttggataaa
gattttgaatcaatgcagcttctctcaagcaagaaaaatgaagaagagatatttgtcaaa
ttggggactgacaaggacaaacgtaaagaggctgaaaaggaggagaaagcgaagaaggct
ctcagcataaatgagtttctgaagcctgctgaaggagaaaaatactatggccctggtcgt
ggacgtggacgtggccgaggtccaagaggaggtttcgggggaaacatgggaaacaatgtt
cgtgccccggcaattgaggatcaaggccagttccctactctgggggcaaagtga
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