Daucus carota (carrot): 108205373
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Entry
108205373 CDS
T05350
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108205373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108205373
Spliceosome [BR:
dcr03041
]
Common components
Common spliceosomal components
SR proteins
108205373
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
108205373
NCBI-ProteinID:
XP_017230804
LinkDB
All DBs
Position
1:26611718..26616126
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AA seq
242 aa
AA seq
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MSHFGRAGPPDISDTFSLLILNITFRTSADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA
FVRYKYSDEAQDAVDNLDRRVVDGREITVQFAKYGPNAERIHQGRIIEKSPRPGLRSRSP
PRRSRDDYYRDRDRDYRRRSRSRSFDRYRGREKHHRYRSRSRSISPDYERECRRSRYDYD
ERRRRSSRESLSPRRSLTPRRSPSPRGRSPYRRSHHRRSPTPQSLTPRDRKSYSRSPISN
NQ
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggacgagccggaccaccagatatctccgataccttttctctcctcatc
ctcaacatcacttttcgcacatcggccgatgatttgttcccgttgtttgataagtatggc
aaggttgttgatatctttatccccagagatcgaaggactggtgaatcacgtgggtttgca
tttgtacggtacaaatattcagatgaagcacaggatgctgttgataatctagataggaga
gtggttgatggtagagaaatcactgtgcagtttgcaaagtatgggccaaatgctgaacgc
attcatcagggcaggatcattgagaagtctcctagacctggtttgagatctagaagccct
ccaagaaggtccagggatgattactacagggatagggacagggattacaggaggagaagc
cgaagtaggagctttgataggtatcgtggcagggaaaagcatcatcgttatcgaagcagg
agccgcagtataagcccagactatgaaagagaatgcaggaggagccgttatgattatgat
gaacgcaggaggaggagttcgcgggaaagcctcagtcctcgaagaagtttaacacctcgg
aggtccccatctcctagaggtaggagtccatatagacgcagccaccataggcgatctcct
actcctcagagtcttacaccaagagatcgcaaatcttactcaaggagtcctatttccaac
aatcagtga
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