Daucus carota (carrot): 108205519
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Entry
108205519 CDS
T05350
Name
(RefSeq) chlorophyll a-b binding protein, chloroplastic
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00196
Photosynthesis - antenna proteins
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
108205519
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
dcr00194
]
108205519
Photosynthesis proteins [BR:
dcr00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
108205519
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Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
108205519
NCBI-ProteinID:
XP_017231003
UniProt:
A0A166IMK5
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Position
1:48556623..48559947
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AA seq
406 aa
AA seq
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MAAASMALSSPSFAGKAVQVAPSSSELFGNGRVSMRKTVKAPVSDSPWYGPDRVKYLGPF
SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN
GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPL
GEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
LADHLADPVNNNAWAFATNFVPGNKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILA
IWATQVILMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRL
AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcatcaatggctctctcttccccttcttttgccggaaaggctgtgcaagta
gctccgtcttcttctgagctctttggaaatggaagagtttccatgaggaaaacagttaaa
gcacctgtttctgacagcccctggtacggccctgacagagtcaagtacttgggcccattc
tctggtgaagctccatcttaccttactggtgaattccctggtgattatggctgggacact
gctggactttcagctgatcccgagacctttgccaagaaccgtgagcttgaagtgatccac
tccagatgggctatgcttggagcacttggctgtgttttccctgagctcttggcccgaaat
ggtgtcaagtttggcgaagctgtctggttcaaggctggctcacaaatcttcagcgagggc
ggacttgactacttgggcaacccaagcttggtccatgcacaaagcatcttggccatctgg
gctacccaggtaattctcatgggtgctgttgagggataccgtgttgcaggagggccacta
ggtgaggttgttgaccccctttaccccggaggaagtttcgacccattaggccttgctgaa
gaccctgaagcatttgctgaacttaaggtgaaggagctcaagaatggaagactagccatg
ttctccatgttcggattctttgtccaggccattgtcacaggaaagggtccattggagaac
cttgctgatcatcttgctgatccagttaacaacaatgcttgggccttcgccaccaacttt
gttcccggaaacaagtttggcgaagctgtctggttcaaggccggctcacagatcttcagt
gaaggcgggcttgactacttaggcaacccaagcttggtccatgcacagagcatcctggcc
atctgggctacccaagttattttaatgggtgctgttgagggataccgcgttgctggtgga
ccactaggcgaggtcatagaccccctttaccccggaggaagttttgacccattaggcctt
gctgaggatcccgaggcatttgctgagcttaaggtgaaggagctcaagaatggtagacta
gccatgttttccatgtttggtttctttgtacaggcaattgttacaggaaaggggccattg
gaaaacctggctgaccacttggcagaccctgtaaacaacaatgcatgggcctttgcaaca
aacttcgtccctggaaagtga
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