Daucus carota (carrot): 108205693
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Entry
108205693 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108205693
04121 Ubiquitin system [BR:
dcr04121
]
108205693
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108205693
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108205693
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108205693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Zf_IFT144_1st
zf-RING_5
zf-RING-like
VPS18_RING_C
Zn_ribbon_RPAB4
FAR1_N
Motif
Other DBs
NCBI-GeneID:
108205693
NCBI-ProteinID:
XP_017231201
UniProt:
A0AAF1APC8
LinkDB
All DBs
Position
2
Genome browser
AA seq
352 aa
AA seq
DB search
MSWATASYWCYRCTRFVRVSSSNDHVICPYCDGGFVEAVDAAPAPESQRRREVYGRRRRN
GGDRSPFNPVIVLRGGGEGGDGGSFELFYDDGAGNGLRPLPETMSEFLMGSGFDRLLDQL
SQIEMNGLGRSEHPPASKTAVESMPRVEIGDRHVSGESQCAVCHESFVLGSEAREMPCKH
LYHSDCILPWLAMRNSCPVCRFELPAETGNESVEGNVEDEAVGLTIWRLPGGGFAVGRFA
GGQRGVGGGERELPVVYTEMDGGFNNSNGGGVPRRVQWGSRSSRVREGGVGRAFRNFVSF
FGRLRNLSHSNSLSSRSGNPISRSRSVSSSTSTSSSVFSRYVRRRRERMDFA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcgacggcgtcgtattggtgttatcggtgcactcgtttcgttagggtttcg
tcaagtaacgatcatgttatttgtccgtactgcgacggagggtttgtagaggcggtggat
gcggcgccggcgccggaatctcagcgccggagggaggtgtatgggaggaggaggaggaac
ggcggcgatcggtcgccgtttaatccggtgattgtgctgagaggcggcggggagggtgga
gatgggggaagtttcgagcttttttatgatgacggcgccggaaatggactccggccgttg
ccggagacgatgtcggagtttctgatgggatctggattcgatcggttgcttgatcagttg
tcgcagattgaaatgaacgggttagggcggtcggagcatccgcctgcttcgaaaaccgcc
gttgaatcgatgccgagagtcgagatcggtgatcgccacgtcagcggggagtctcagtgt
gctgtgtgtcatgaatcgtttgttttaggttctgaagcgagggagatgccgtgtaagcat
ttgtatcattccgattgtattctcccgtggcttgcgatgaggaattcgtgccctgtgtgt
cgatttgagctgcctgcggagacggggaacgagagtgtagaggggaatgtggaggatgag
gcggttggattgacaatttggaggcttcctggtggcggattcgcggttgggaggtttgcc
ggtggacagagaggtgtaggaggcggagaacgggagcttccggttgtttatacagaaatg
gacggcggtttcaataatagtaatggcggtggtgtgccgaggagagttcagtggggatca
agaagtagtagagtgagggaaggtggagttgggagggctttccggaattttgtgtcgttt
tttgggaggttaaggaatttgagtcattctaattcgttgtcttcgaggtcggggaatcca
attagcagaagcagaagtgtgtcgagttcaacttcgacatcgagttcagtgtttagtaga
tatgtgaggaggcgccgtgaaaggatggattttgcgtag
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