Daucus carota (carrot): 108205701
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Entry
108205701 CDS
T05350
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108205701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108205701
Spliceosome [BR:
dcr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
108205701
Complex B
108205701
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
108205701
NCBI-ProteinID:
XP_017231214
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All DBs
Position
2:complement(46320181..46323489)
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AA seq
199 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVREYYQQYEQQQHQILIDERIKAHLGQ
AAAFQQVGAAYNQMRPRMAVLPTPMMPMPGNPQMAMTGPLLPGMRPPVLMRPAYMPGPGM
PPMTTTPPGAPPLPGQGQVDGAPRPMLMNPPPIVPGSAPASSAAFTPVMYQANPNPVAPS
GGFDSSNVNAQPQAAESGH
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggtactactgtgattattgtgacacttatctcactcatgattctccgtcggtg
aggaagcagcataatgcaggatacaagcacaaggcaaatgtgcgggagtattatcagcaa
tacgagcagcaacagcaccagattttgattgatgaaaggatcaaggctcatctggggcaa
gctgctgcctttcagcaagtgggtgcagcttacaatcagatgagaccccgtatggctgta
ttacctactcctatgatgcccatgcccggtaatccgcaaatggccatgactggcccgttg
ttacctggaatgaggcctccagttttgatgagaccagcttacatgcccggcccaggcatg
cctccgatgacgaccactccacctggtgctcctcccttgccaggccaaggccaagttgac
ggtgcccctaggcctatgttaatgaatcccccgccaatagttccgggcagcgcacctgct
tcaagcgcggcgtttacaccggtgatgtatcaagccaacccaaatccagtagcaccgagt
ggaggatttgatagttccaatgtgaatgcacaaccccaagctgctgagtctggtcattag
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