Daucus carota (carrot): 108206078
Help
Entry
108206078 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108206078
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00260
Glycine, serine and threonine metabolism
dcr00400
Phenylalanine, tyrosine and tryptophan biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
dcr01230
Biosynthesis of amino acids
Module
dcr_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108206078
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
108206078
Enzymes [BR:
dcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
108206078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-GeneID:
108206078
NCBI-ProteinID:
XP_017231747
LinkDB
All DBs
Position
2:complement(50481347..50484589)
Genome browser
AA seq
500 aa
AA seq
DB search
MAQSLFVSSNTISSPHFLRGEEHCSSINASKTPPGHLKLLHNCRSTKTTIRAASQSVEIP
RQWYNLVADLPVKPPPALHPKTYKPVTPQDWSPLFPEELIKQENSNARFIDIPEEVIDVY
ELWRPTPLIRAKRLEKLLETPAKIYYKYEGGSPAGSHKPNTAVPQVWYNSQEGVKSVVTE
TGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKPYRKLMMQTWGAKVHPSPSTITEAGRR
ILEKDPASPGSLGIAISEAVEVAAKNSDTKYCLGSVLNHVLLHQTVIGEECIKQMEAIGV
TPDVIIGCTGGGSNFGGLAFPFIREKLAGKINPVIRAVEPAACPSLTKGVYAYDYGDTAG
MTPLMKMHTLGHEFIPDPIHAGGLRYHGMAPLISHVYDLGFMEAYAIPQIECFRGAIQFA
RTEGLIPAPEPAHAIAATIREALHCKETGESKVILMAMCGHGHFDLPAYDKYLQGNMIDL
SFAEERIQDSMANIPNMLHK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtctctcttcgtttcctccaatactataagctctcctcatttcctcagaggg
gaggagcactgcagttcaattaatgcgtcgaaaaccccaccgggtcatctgaagctgtta
cataactgtagatccacaaagacaactattcgtgccgcttctcagtcggttgaaatccct
cgtcaatggtacaatctagttgcagatcttccggtcaaacctcctccagctctgcatcca
aaaacttataaaccagttactcctcaagattggtctccactatttcctgaagagttgatt
aagcaggagaatagcaatgcacggttcattgacatcccagaggaggttattgatgtttat
gagctctggcgcccaactccacttatcagagcaaagaggctggagaaactgcttgaaacc
cctgccaagatatattacaagtatgaaggtggaagcccagctgggtcgcataaacccaac
actgcagtccctcaggtctggtacaatagtcaagaaggcgtaaagagtgttgtgacagaa
actggtgcaggccaatgggggagttcattggcttttgcatgcagcttgtttggtctcaac
tgtgaagtgtggcaagttcgtgcctcttatgatcagaagccttatcgtaaactaatgatg
caaacatggggtgctaaggtgcacccttctccgtcaactattactgaagctggtcgaaga
attcttgaaaaggatccagcaagcccaggcagtttagggatcgcaatatctgaggctgtc
gaagttgcagccaagaattcggatacaaagtattgtcttgggagtgtacttaaccatgtt
ttattacaccagacagttattggcgaggagtgtattaagcagatggaggctattggagtt
actccagatgtcattattggatgtactggtggtggttcgaattttggtggccttgctttt
cctttcatccgggagaaactcgctggaaaaattaaccctgttatacgagcagttgaacct
gcagcatgcccttcattgacaaaaggggtgtatgcatatgactatggagataccgctgga
atgactcctttgatgaagatgcacacccttggacatgaattcatacccgaccctattcac
gccggtggtttacgttaccatggcatggcaccactgatctcccatgtctatgacttgggc
tttatggaagcatatgctatacctcagattgaatgctttcgaggtgcaatacaatttgcc
aggaccgagggactaataccagcacctgaaccagcgcatgctatagctgccaccattagg
gaagctctgcactgtaaagaaactggagaatcgaaagtcatcctcatggcaatgtgcgga
catggtcattttgacctgcccgcttatgataaatatttgcagggaaatatgatagatttg
tcatttgcagaggagagaattcaagattcaatggccaacattcctaacatgttacataag
tga
DBGET
integrated database retrieval system
