Daucus carota (carrot): 108206112
Help
Entry
108206112 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108206112 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108206112
Enzymes [BR:
dcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108206112
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108206112
Prokaryotic type
108206112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
cpSF2-GREB1
Motif
Other DBs
NCBI-GeneID:
108206112
NCBI-ProteinID:
XP_017231792
UniProt:
A0A166DYG6
LinkDB
All DBs
Position
2:43411815..43418091
Genome browser
AA seq
373 aa
AA seq
DB search
MPDSESQPLSSQNIQKSPELSPESSDRPAKLAKLIDEDIELTDIEETMNQRPGIQRYLLA
VEYSGTRFCGAQQQPTARTVVGVLQEAFRKFIGQSVSVTCSSRTDAGVHALSNTFHVDVE
RISKRKPGELLPPHEPGVVIKAVNHFLQKNEGDITVLDARCVSSDFHARYRAQERTYFYR
LLSGPQPVSTFEKDRAWHVPEALDLSAMQKACKILAGHHDFSSFRSAACEAKSPIRTLDE
LSVVEVVSAPYFPPIMEKEQHKLLDSLEFSESTKGIACLSSAPEENREEDSNSESTQQFG
MRRKHRCFVVTARSQSFLYHQVRLLVGTLKSVGTGDLTIPDVERILKAKTVTAASPMAPA
CGLYLARVKYNLP
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgccggatagtgaatcacagccgttgagctcccaaaatattcaaaagtcgcctgagtta
tcgccggaatcttcggatcgtccggcgaagctcgcgaaacttatcgacgaagacattgaa
ttaactgatatcgaggaaacgatgaatcaaaggcctggaattcaaagatacttattggca
gttgagtacagtggcactcgattttgtggtgctcaacaacaacctaccgccagaactgtt
gttggtgttctccaggaagcattccgtaaatttattggacagtcggtctctgtgacctgc
tcaagtcgaacagatgctggagtacatgccctatcaaatacttttcatgtagatgtggag
cgcataagtaagaggaaacctggagaactattgcctccacatgaacctggtgttgttata
aaagctgtgaatcattttctgcagaagaatgaaggcgatattacagtcctggatgctaga
tgcgtttcatctgattttcatgctagatatagagctcaagagcgcacgtacttctatcgc
ctgctaagtggcccgcagcctgtgtcaacttttgaaaaagaccgggcttggcatgttcct
gaggctctggatctatcagcaatgcagaaagcatgtaaaattcttgctggacaccacgat
ttcagttcctttagatcggcggcttgtgaggcaaaatcacctataagaaccttggatgaa
ctaagtgtcgttgaagttgtttctgcaccgtattttccgccgatcatggaaaaggaacaa
cataaattgcttgattctttagagttctctgagtctacgaaaggtattgcctgtttatca
tctgctcctgaagaaaatagggaagaagactctaatagtgagtctactcaacaatttggc
atgagaaggaagcatcggtgttttgtggtaacagctcgatcacagtcttttctgtaccac
caggttagattgcttgtgggaactcttaaatctgttggtactggagatctaacaattcct
gatgttgaacgcatcttgaaggcaaagacagtaactgcagccagtccgatggcacctgca
tgtggtctgtaccttgctcgtgtgaaatacaacctgccttga
DBGET
integrated database retrieval system
