Daucus carota (carrot): 108206147
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Entry
108206147 CDS
T05350
Name
(RefSeq) protein gamma response 1 isoform X1
KO
K13096
splicing factor 4
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108206147
Spliceosome [BR:
dcr03041
]
Complex A
Other components
Complex A specific factors
108206147
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Gene cluster
GFIT
Motif
Pfam:
SAE2
HTHP
Motif
Other DBs
NCBI-GeneID:
108206147
NCBI-ProteinID:
XP_017231837
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All DBs
Position
2:complement(39366180..39373043)
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AA seq
722 aa
AA seq
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MDVIMVTTFDFMVLSRALMFFVIVSDMQGDLRTSTEPAYSIDSDAEIDVSKVSALLVATV
QEAKDRISEVEHMFCSQLFPDYQAKSINLHKVYLEARKDAEASNKRERDLLLEIEKLQLE
KQQAFKESQSLKLVNAGFERFVRASKCILDLRKNLKKVNAKLGGGKEHQGLLQYLKLNAD
VVLNNDNALQELEEKIMLIQDSSCLDTEAEKQQDLHTNHKKVDREMEMEMGKELLHLVQS
NVMLVLEKESLHREHEEKTTVLQGKIGNLEKKVNELEMELRSKSKQSDKENQSYEYLLKR
INSEVKNNEQLLRDNGKEKRLLTAKLESLAGTVEELQKELRQKEKEVEDSRNLQEELRQQ
IDLNGLEMLKSEQELEGLHKERSLHMAKLKVFEEKVDQLQLELRERSMESAEGIELHGKL
LKQIESKDCELLSEKKKRKNVVDSYKRLKSQYNFLCARNGLTPENMLTPNKKEDETVSVR
HSPDPLTSPGSGDKVLKSPVVNSELTRQQDNQENLKDNQGVVPLKSLNSDLPCSSSPLSR
LPGWTNANARPLSGMKRPGSYWRETRSHQNRGGPDPHDDFLNTPLENIRGNMKKPTKEEH
DVQNPASKDMISHSSDDETQNLNVDPDPAPQKQQILPLRAGTKGFKYVEPVRKKADRENL
KGIECKQCKKFYDAVLPDGGGKDSDKQNLRCEHHEGVSRHRYRYAPPSTPEGFWNIGFES
EM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcattatggtaactaccttcgactttatggtactatcaagggctttgatgttt
tttgttatagtctctgatatgcaaggagatctacgaacttccacagaaccagcatattct
attgacagcgatgctgaaatagatgtctcaaaagtcagtgctttactggtagccacagtt
caggaagcaaaagacagaatttctgaagtagagcatatgttctgctctcagctttttcca
gattatcaggcaaaatctataaacttgcataaggtttacttagaggcaagaaaagatgcg
gaagcatcgaataagagggagagagatctcttactagaaatagaaaagctccagcttgaa
aagcaacaggcctttaaagaaagccagtctttgaagttggtgaatgcggggtttgagaga
tttgttcgggcatcaaagtgtattctagatcttcgaaagaatttgaaaaaagtgaatgca
aagttggggggtggaaaagaacaccagggtttactacagtatcttaaattgaatgcagat
gtcgtacttaataatgacaatgcattacaggaacttgaagagaaaatcatgcttatacag
gattcaagttgtttagatactgaagcggagaaacaacaggatcttcatacaaatcataag
aaagtagacagagaaatggaaatggaaatggggaaggagctactccatctggtccagtca
aatgtgatgctggttctagaaaaggaaagcctacatagagaacatgaagaaaagacaaca
gtactacaggggaaaatcggtaatctagaaaaaaaggttaatgagcttgaaatggagctc
agatcaaaatccaaacaatctgacaaggaaaaccagtcctatgaatatctcctaaaaagg
ataaactcggaggttaagaataatgagcaactgttgagagataatgggaaggagaaacgg
ctacttacagccaaactagaaagcttagctggcactgtagaggagttgcaaaaagagcta
agacagaaagagaaagaagtggaagacagcagaaatttacaagaagagttgcgccaacaa
attgatctaaatggtttggaaatgttaaagtctgaacaggaactggaagggcttcataaa
gagagaagcctgcatatggccaagcttaaagtttttgaggaaaaagttgatcaacttcaa
ttagagcttagagagagaagcatggagtctgctgaaggaatagagttgcatgggaaatta
cttaagcagattgaaagcaaagattgtgagttgttgtctgaaaagaagaaaaggaaaaat
gtcgttgattcttacaagaggctgaaatcccagtacaacttcctctgcgctagaaatggt
ctaacgccagagaatatgcttaccccaaacaaaaaagaagatgaaacagtttcagtgagg
cacagtccggatccattaacttcaccaggcagtggggataaagttttaaaatctccagtt
gttaattctgaattgaccaggcagcaggataaccaagagaatttaaaagataaccaagga
gtagtaccacttaaaagcttaaactctgacttgccatgtagctccagtcctctaagtaga
ctaccgggctggacaaatgcaaatgctagaccattatctggtatgaagcgcccaggttca
tattggagagaaaccaggtctcatcagaatcgaggtggtcccgatccgcatgatgatttt
cttaatactcccttggaaaacatcaggggaaatatgaaaaaacccaccaaggaagaacat
gatgtccaaaatccagcttcgaaggatatgatatctcatagttcagatgatgaaacacag
aacttgaatgtcgatcctgaccctgctccacagaagcagcaaattctacctttaagggct
ggaacgaaaggttttaagtatgtggaaccagtaagaaagaaagctgatagggagaattta
aaaggcattgaatgcaagcagtgcaagaagttctatgatgcagttcttccggatggcggg
ggaaaggatagtgataaacaaaatttacgttgtgaacatcatgaaggagtttcaaggcac
cgctataggtatgcacctccctcaactcctgaagggttttggaatattggatttgaatct
gaaatgtag
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