Daucus carota (carrot): 108206217
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Entry
108206217 CDS
T05350
Name
(RefSeq) pumilio homolog 4
KO
K17943
pumilio RNA-binding family
Organism
dcr
Daucus carota (carrot)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
NABP
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
108206217
NCBI-ProteinID:
XP_017231933
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All DBs
Position
2:41164635..41171875
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AA seq
1042 aa
AA seq
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MVNGNQRDVLTNANVGSNINGVIMRGSNRNLENSNMESELELLLRGRHNRGAIGPERDVN
MYRSGSAPPTVEGSLTAAGSLFHNQNFVLVDNNSNNTSGSSTVNGALTEEEIRSHPAYLS
YYYSHENHNPRLPPPLMSKEDWRVAQRFQLGGSSFGGIGDLRKNMVDDGVGSLFSMQPGM
PVKSTAEDDLMELRKTAARNNISRKNSAEFVDRGSDGVVVGPRAGMGMRRKSFADILQEG
IEQPSSLSGHQSRLANRSSFGEIEDASSVSRSHSLEFFNGPTASERLHPGAAATGLPRVQ
HHGSQLPNSFASAVGSSLSRNRTPDTHLAGRSLSPSIASVSSRNSLVDDKIGRSSLNHSS
SMTELSDVAASLSGLSLSKHDLDPLQTQLAHRFDKQCGKQSNMSNGYGQSLPQSNEVSRA
EKLGLATNYVDLLKENGLATDMNAVKLGLNEQAIFPRRTSSSANLQSKLNSSRNANFENP
NMHYLAENYPQPDFQGHLQTGYFTDQELKAMISNQLNAAATLSNTGMVRNLRSGNQAGFD
LHSPVMDPRYIQYLQQSSEHAMHAAALCDPSRRGNASGPSFGHGDLQSLQKAYLATLVAQ
QKPQFDLGKNGRLNHQYYANSSFGPMTYQGNLIPNTVPSFGTKGPLLQDDRISNYTSMLQ
NQMGGSSGSWHSETGMNMERNFASSLLEEIKNNKSKSFELLDVVDHVVDFSKDQYGSRFI
QQKLETATEEEKMKIFSEIIPHARSLITDVFGNYVIQKFFEHGTERERKELASQLIGHVL
PLSLQIYGCRVIQKALEVVDVDQQTKLVAELDGSIMKCVRDQNGNHVIQKCIEYVPQDRI
QFVISSFFGEVVSLSTHPYGCRVIQRVLEHCDDPKTQQIIMDEIMNSVCTLAQDQYGNYV
IQHVLQHGKPHERSIIIEKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQLLVNEMLGST
DENEPLQAMMKDQFGNYVVQKVLETCDDHSREIILSRIKVHLNALKRYTYGKHIVSRVEK
LVTAGERHIALSSSNSSRGISS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgggaatcaaagagatgtgcttactaatgcaaatgtaggaagtaatataaat
ggtgtgattatgaggggttcaaacaggaatttggagaatagtaacatggagagtgagctt
gagttgctgctgagaggacggcataatcgaggcgcgattggaccggagagggatgtgaac
atgtacaggagtggcagtgctccaccaactgtggaagggtctttgactgctgcaggcagt
ttgtttcataatcaaaattttgttctggttgacaataatagtaataatactagtggtagt
agtacagttaatggtgctttaacggaagaagaaattaggtctcatccagcatacttgtcg
tactattattcacatgaaaatcataatcctagactacccccgcctttgatgtcgaaagag
gattggcgagttgcacagaggtttcaattaggggggtcttcgtttggtggtataggggac
ctaaggaagaatatggttgatgatggagttggttcgttgttctcaatgcagccaggtatg
cctgtaaagagtactgccgaagatgatctaatggaattgagaaagactgctgctaggaat
aatatatcacggaagaactctgctgagtttgtagacagagggtctgatggggtagttgtg
ggaccgagagctggaatgggtatgcgcaggaagagttttgctgacatacttcaggaagga
atcgagcaaccatcttccttgtcaggtcatcagtcacgacttgcaaatcgtagttcattt
ggtgaaattgaagatgcaagcagtgtctctagatctcattcactagagttttttaatgga
ccaacagcctctgagagactgcatcctggggcagctgccacaggtcttcctagagtccaa
caccatggttctcaactgcctaattcttttgcatctgctgtgggatcatctttgtcaaga
aatagaacacccgatacacatctggctgggagatctttaagccctagcattgcttctgta
agtagtaggaattcgcttgttgacgataagattggcagaagttcccttaatcattcttct
agtatgactgaactttctgatgtggctgcctctttatctggcttaagtctttcaaaacat
gacctggatcccttacaaacacagctcgctcatagatttgataagcaatgcggaaaacag
tctaatatgtcaaatggctatggtcagagcttgccacaatccaatgaagtgtcaagagct
gagaagttaggtcttgctaccaactatgttgatttactaaaggaaaatggacttgcgaca
gatatgaatgcagtgaagctaggtttaaatgaacaagcgatcttcccaagacgaacatct
tcctctgccaacctgcaatcaaagttgaactcttcccgcaatgcaaattttgaaaatcct
aacatgcactacctagccgagaactaccctcaaccggattttcagggtcatctgcagact
gggtattttactgatcaggagctaaaagcaatgatcagtaatcaacttaatgcagctgca
actttgagtaatactggaatggttcggaatttaagaagtggaaaccaggctgggtttgac
cttcattcaccagtcatggatccccgctatattcagtacttgcagcaatcttccgaacat
gcaatgcatgctgcagctctctgtgatccttctcggcgtggaaatgcttcagggccttcc
tttggtcatggagatctgcaaagtcttcagaaagcatatcttgccacactggtcgctcaa
cagaagccacaatttgacttgggtaagaacggccgcttaaaccatcagtactatgcgaat
tcgtcatttggccctatgacataccaaggaaacttgattccaaatactgtaccttccttt
ggaaccaaaggtcctctgcttcaagatgacagaatttcaaattatacatccatgctgcaa
aatcaaatgggaggatcttcagggtcatggcattctgaaactggaatgaacatggaaaga
aattttgcatcatcgctactggaagagatcaaaaacaacaaatccaagtcttttgaactt
ttggatgttgttgatcacgttgttgatttcagcaaggatcagtatggtagccggtttatt
cagcagaaacttgaaactgccacagaggaagaaaagatgaagattttctcagaaataatt
cctcatgctcgtagtttgattactgatgtctttgggaattatgtcatacagaaatttttt
gagcatggcactgaaagggaaaggaaagagttggctagtcaacttattggtcatgttttg
cctctgagtctacaaatatatggttgcagagttatccaaaaggccttggaggtggttgat
gttgatcagcaaaccaaactagtcgcagagcttgatggttccataatgaaatgtgttcgt
gatcagaatgggaatcatgttatacaaaagtgtattgaatatgttcctcaagatcgaatt
cagtttgtaatatcatctttctttggggaagttgtgtctctttccactcatccatatggt
tgtcgtgtcatacagagggttcttgagcattgcgatgatcctaaaacacaacaaattata
atggatgaaatcatgaattcagtctgcactctggcacaagatcagtatggaaattatgtt
attcagcacgtcctacaacatgggaaaccccatgaacgatctattataatagaaaagctc
gcaggacagattgtgaagatgagccaacaaaagtttgcttctaatgttgttgaaaagtgc
ttgacatttggcggtcctgaagaacggcaacttttggtgaatgagatgctaggttccaca
gacgaaaatgagcctttacaggctatgatgaaagatcaatttggcaactacgtggtgcaa
aaagttttagagacttgtgatgatcatagccgtgaaataattctctctcgcatcaaggtg
catctaaatgctctgaagaggtacacctatggaaagcacattgtttctcgggttgaaaag
cttgtaaccgctggtgaaaggcacattgcgctgtcttcttctaattcgtcgcgaggcatt
tcaagctag
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