Daucus carota (carrot): 108206237
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Entry
108206237 CDS
T05350
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108206237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108206237
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108206237
mRNA degradation factors
5'-3' decay
Decapping complex
108206237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
WH1
Motif
Other DBs
NCBI-GeneID:
108206237
NCBI-ProteinID:
XP_017231955
UniProt:
A0AAF1AQT2
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Position
2:52299387..52304412
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AA seq
356 aa
AA seq
DB search
MSNRSGKLMPNLDQQGTRVLNLTVLQRMDPYIEQILITAAHVTFYAFDIDLNQWSRKDVE
GSLFVVERNCQPQFQFIVMNRRNTENLVENLFRDFEFEVQVPYLLYRNEAQEVNGIWFYN
SHECEDVANLFTRILNAYAKIPSKLKVASNKSEFEELEAVPTSAVIEGPLEPSFNVPDDL
SFFNFFSKAKNVGHNSSNILSSGHKSAVPLSSHILNAAPSPASAAQTPPRPLSSSFPMPL
HDIPDAVNSSNPVANLLKPFSFFKPPSSVPLTPLIYPSLPTLPLQTPLNTQQSHGTPMLQ
PFPPPSPPISLTPSSTPPASYGPLSRDEIRDALLLLVQDNQFIDLFHQALLRVHRS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcggagcggaaaattgatgccaaatcttgatcagcagggcacaagagtgcta
aatttaacagtactacagagaatggatccttatattgaacagatattaatcactgcagcg
catgtcacgttttatgctttcgatatcgatcttaatcaatggagtcgcaaagatgttgaa
gggtctctttttgttgtcgagaggaactgtcaacctcaattccagttcatagttatgaat
aggcgaaatacagaaaatcttgtggaaaatctctttcgagattttgagtttgaagttcaa
gttccatatcttctgtatcgcaatgaagcccaagaagtcaatgggatctggttttataat
tctcatgaatgtgaagatgttgctaatctatttacgaggatactcaacgcatatgcaaag
attccttcgaagctgaaagtagcatcaaacaaaagtgaatttgaggaactggaagcagta
ccgacctctgccgtgattgaagggccgctggaaccatcttttaatgtaccagatgatctt
tcctttttcaacttctttagtaaggctaaaaatgtagggcataattcttccaatattttg
agttctggacataagtctgctgtccctttatcttctcacattcttaatgctgccccttct
cctgcatcagctgcacaaactccacctcgacctctttcatcttcttttccaatgccactt
catgatatccctgatgcagttaatagtagcaatcctgttgccaatcttctcaaacccttt
tctttttttaaacccccttcttctgtaccactcacaccactgatatatccatctttgcct
actcttcccctgcagactcccctgaatacacaacaatcgcatggaactcccatgcttcaa
ccttttccaccaccttctccaccaatatctctaactcctagttcaacaccacctgcaagt
tatggaccactaagcagagatgaaatccgtgatgcacttctattgcttgttcaggataat
caattcattgacctgtttcatcaagcactgctgagagtccaccgatcttga
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