Daucus carota (carrot): 108206325 Help Entry 108206325         CDS       T05350                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism dcr  Daucus carota (carrot) Pathway dcr04120   Ubiquitin mediated proteolysis dcr04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:dcr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     108206325  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     108206325  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:dcr04121]     108206325 Enzymes [BR:dcr01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      108206325 Ubiquitin system [BR:dcr04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     108206325   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      108206325 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st EIF3I WD40_MABP1-WDR62_1st zf-C3HC4_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 zf-C3HC4 Beta-prop_EML WD40_RFWD3 Beta-prop_WDR75_1st zf-C3HC4_3 WD40_like zf-RING_2 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N zf-RING_UBOX Beta-prop_IFT140_1st zf-RING_5 Beta-prop_SCAP zf-C3HC4_4 U-box Beta-prop_SPT8 Beta-prop_IFT122_2nd zf-rbx1 DUF1664 Motif Other DBs NCBI-GeneID:  108206325 NCBI-ProteinID:  XP_017232072 UniProt:  A0AAF0WDP1 LinkDB All DBs Position 2:10695930..10704157 Genome browser AA seq 679 aa AA seqDB search MVGSSSVGGVVPRVKSEQVMMASGGGITQPQGQVMPKVEEGVEAEMMEMDKDFLCPICMQ VIKDAFLTSCGHSFCYMCVVTHLENKSDCPCCAHFLTTSHLHPNFLLNKLLAKTSARQIA KSSTPFEQLCQALQQGCEVSVKELDSLLAMLAEKKRKMEQEEAETNLQIMHDFLQCLRKQ KLDELNGVQTDLHYIKEDIGAVERQRIELYRARERYMVKMRMPTEDTSAKPAWHSLIDKR SSAIMSSPNVQGQSWMGSGSLQNRRADAKALENPQMLQRKDACSGSDSPHSTQSAVSVAR KRRIHAQFNELQECYLQRRRHQDRKAHKQEDGDITAVSRQGYCAGLEDFQSVLSSFTRYS RLRVIAELRHGDLFHATNIVSSIEFDRDDEFFATAGVSRRIKVFEFSSVVNESADVQCPV VEMSTRSKLSCLSWNKYTKNHLASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSKT EPSMLVSGSDDCKVKIWCMKQEASVLNIDMKANICSVKYNPGSSYHVAVGSADHNIHYYD LRNISQPLHIFKGHRKAVSYVKFVSNNELASASTDSTLRLWDVKENIPLRTFRGHTNEKN FVGLSVNSEYLACGSETNDVFAYQKAISKPAAWHRFGADSEGEEDPASYFISAVCWKSDS PTMLTANSQGTIKVLVLAA NT seq 2040 nt NT seq  +upstreamnt  +downstreamnt atggtggggagtagctcagtaggtggagttgttccgcgggtaaaatccgagcaagttatg atggcgagcggtggcgggatcacacagcctcaagggcaagtgatgccgaaagtggaggaa ggagtggaggcggagatgatggagatggacaaggattttttgtgtccgatttgcatgcaa gtgattaaggatgcgttcttgacttcgtgtggacatagtttttgttacatgtgtgtggtt actcatttggagaataagagtgattgtccttgttgtgctcattttctgaccactagtcat ctgcacccgaattttcttctcaataagttactggcaaagacctctgctcgccaaatagca aaatcttcaactccattcgaacaactttgtcaggcactacaacagggatgtgaggtatca gtcaaggagctcgacagccttttagctatgttggctgagaagaagcggaaaatggagcag gaagaagccgagacaaatttacagataatgcacgactttttgcaatgcttaagaaagcaa aagcttgatgagctcaatggggtacaaactgatctccattacatcaaggaggacataggt gctgttgagaggcaaagaatagagttgtatcgagcacgagaaagatatatggtaaaaatg aggatgcctacagaggacacttcagcaaaaccagcatggcactccttgattgataaacgt agtagcgcaataatgtctagtcccaatgtgcaaggtcagtcctggatgggttcaggcagt ttgcaaaataggagagccgatgcaaaggctctggaaaatcctcaaatgctacaaaggaag gatgcttgtagtggatctgactcaccacacagcacccagtcagcagtctctgtagcacga aagaggcggattcatgcacagttcaatgagctacaagaatgttatctacaaaggaggcgc caccaggatagaaaagcacataagcaggaagatggggatataacagctgtaagcagacaa ggatattgcgcaggacttgaagattttcaatctgttctgtcaagttttacacgctacagc cggcttcgggttatagctgagctcagacatggggatctttttcatgctaccaatattgtt tcaagtatagaatttgatcgagatgatgaattttttgctactgctggagtttctcggcgt attaaagtgtttgaattttcttcggtggttaatgaatcagcagatgtgcaatgccctgtc gttgaaatgtctactcgctctaaacttagttgcttaagctggaacaagtacaccaaaaac cacttagccagcagtgattatgagggtatcgtaactgtctgggatgtaaatacccgtcag agtgtgatggaatatgaggaacatgagaaaagagcgtggagtgttgatttttctaaaaca gagccttcaatgcttgtgtctgggagtgatgactgcaaggtcaagatctggtgtatgaaa caggaagcaagtgttcttaatatagacatgaaagcgaatatatgttctgtgaagtataat cctggatctagctatcatgtggctgtgggctctgcagatcataacattcactattatgac ctgagaaatataagccagccactacatatctttaaaggtcacagaaaagctgtttcctat gtaaaatttgtgtctaacaacgagcttgcctctgcatctaccgacagcacattgcgattg tgggatgtgaaggaaaacataccattgcgcacatttagaggacacaccaatgagaagaat tttgtaggtctctcagtaaatagtgaataccttgcttgtggcagtgaaacaaacgatgtg tttgcatatcagaaggctatctcgaaaccagcagcatggcatagatttggtgctgactca gaaggggaggaagatcccgcttcttacttcattagtgccgtttgttggaaaagtgatagt ccaacaatgttaacggcaaacagtcaaggaacaataaaagttcttgtgcttgctgcataa

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