Daucus carota (carrot): 108206979
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Entry
108206979 CDS
T05350
Name
(RefSeq) DNA polymerase II subunit B4
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03030
DNA replication
dcr03082
ATP-dependent chromatin remodeling
dcr03410
Base excision repair
dcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108206979
03410 Base excision repair
108206979
03420 Nucleotide excision repair
108206979
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108206979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108206979
03036 Chromosome and associated proteins [BR:
dcr03036
]
108206979
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108206979
Enzymes [BR:
dcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108206979
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
108206979
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
108206979
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
108206979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
Amidase
Bromo_TP
CENP-T_C
LonB_AAA-LID
TAFII28
Motif
Other DBs
NCBI-GeneID:
108206979
NCBI-ProteinID:
XP_017232924
LinkDB
All DBs
Position
2:38481909..38485002
Genome browser
AA seq
127 aa
AA seq
DB search
MANKTAPVADPEELPKTIVRRLVKDTLSQCSKDGDISVLKDSLLAFSVCVRIFIQYLSAT
ANDVCKEANRNIITANDVFKALEEIEFPELIEPLKASLEEFKKKNSVKRSGPSIGKDRGK
KSKVEDD
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaaacggcaccagtagcggacccggaggagctgcccaagactatcgtgcgc
cgcttggtgaaggatacgctttctcagtgctctaaagacggcgacatttcggtactcaaa
gactctctcctggctttctctgtttgtgttcggatcttcattcagtacctctctgcaact
gctaatgatgtgtgcaaggaggcaaacaggaatataattactgctaatgatgttttcaag
gctcttgaagagatagagtttcctgaattgattgagccgctaaaagcttctcttgaagag
tttaagaagaaaaactctgtgaaaaggtcaggaccctccatcgggaaggatcgtgggaag
aaaagcaaagtagaggatgactag
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