Daucus carota (carrot): 108207026
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Entry
108207026 CDS
T05350
Name
(RefSeq) amino acid transporter AVT1I
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108207026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108207026
Transporters [BR:
dcr02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
108207026
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Pex24p
DUF2484
DUF3180
Motif
Other DBs
NCBI-GeneID:
108207026
NCBI-ProteinID:
XP_017232981
UniProt:
A0A166EAX8
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Position
2:47422774..47424727
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AA seq
415 aa
AA seq
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MEALSVDSVESQNNISAAEENCQGTSFTRTCFNGLNALTGVGILSIPYALSQGGWLSLII
LFVIALLCFYTGLLLRRCMDLNPTIKTYPDIGQVAFGSTGRALISTFMYLELYFVAVEFL
ILEGDNLHKLFPDVNFHIAGISIPGKQGFVLLAALLVLPTTWLRNLGLLAYISASGVLAS
IVLVCSVFWVGAFDGVGFDEKGSLWNWNGLATAISLYTFCYCGHAVFPTLCNSMKNRAQF
PKVLLVCFVLSTICYGSMAVLGYLMYDGSLMSQVTLNLPTKKLSSKDAIYMTLMNPITKY
AIIVSPINTAIEATFPLLKRRSISLFIRTVIVCSTVLVALTIPFFGFVMALIGAFTGTSV
SMLFPSIFYLKINKAARKFGVELVIIILIVMMGASVAVVGTYTSLRDIARHAHSN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttgagtgtggactcggtagagagccaaaacaatatctcagctgctgaagaa
aattgccagggcactagcttcaccaggacttgctttaatggactaaatgctctcacaggt
gtagggatattatcaattccatatgcactttctcaaggagggtggctatccttaatcatc
cttttcgtcatagcacttctgtgtttttataccggactgcttctgcgtcgctgtatggat
ttaaatcctactattaaaacttaccctgatatcggacaagtggcctttggaagcacagga
agggctctgatatcaacttttatgtatcttgaattgtactttgttgccgtagagtttctg
attttagaaggtgataacttacataagctatttccggatgtaaattttcacattgctgga
ataagtattccaggaaaacaaggctttgttttactagcagcattattagtattgcctaca
acctggctaaggaatttgggattgttggcttatatttctgctagtggtgtattggcttct
attgttctggtatgttctgttttctgggttggtgcatttgatggcgtgggattcgacgaa
aaaggaagcctttggaactggaatggcctggctactgctataagcctgtataccttttgt
tattgtggacatgcagtgtttcccaccctctgcaattcaatgaaaaatcgcgctcaattt
cccaaggtgctgttggtctgttttgttctaagcaccatttgttatggttcaatggctgtt
ctaggctacttgatgtatgatggaagtttgatgtctcaagtgactctgaatcttcccact
aaaaagttaagctcaaaagatgcaatatatatgacgctcatgaaccccatcaccaagtat
gccattattgtgtctccgattaacacagctattgaagccacatttcctttactaaaaaga
cgttcaataagtctctttatcaggacagttatagtgtgcagcactgttctagtggcacta
accataccatttttcgggtttgtcatggcattgattggtgcatttacaggtacaagtgtt
tcgatgttgttcccgtccatattctacctgaagatcaacaaagctgctaggaagtttggg
gttgagttggtgatcattatcttgatagtaatgatgggggcatcagtagctgtagtgggt
acctatacttctttgcgtgatattgctagacatgcacattcaaattaa
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