Daucus carota (carrot): 108207604
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Entry
108207604 CDS
T05350
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00040
Pentose and glucuronate interconversions
dcr01100
Metabolic pathways
Module
dcr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108207604
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108207604
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108207604
NCBI-ProteinID:
XP_017233529
UniProt:
A0A166DYL9
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Position
2:complement(43472259..43474609)
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AA seq
439 aa
AA seq
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MGSIRSYNVQGAILGVLCMVLLELCLVNAHQFDDTFDPITRRALVAGTQGRGGGQPVDPA
QHPVAGGAGFKCVDVSNFNIKGDGQSDATDGVIAAWQEVCGCPTPSKLVIPRGTWLTAEL
DFRGPCAAPQIVIEIQGTLLAKPDKQSFPKGFWINIMGVHGVVINGGGTLNAQGEKIWHT
RGVGEKGTPLPDSLVLAQSNDSIVENIHLVNGKGFNMKVYENENVLIQNVHITSPDESPN
TDGIHIGRIKNVRILDSFLGVGDDCISIGDGSIDVYIKNIMCGPGHGISVGSLGRFTYET
DVRNVWVENCTFTKTLNGARIKTFHDSPQIEATNITYCNLVMNDVYNPIIIDQNYAFNKP
TPSRVKLSNIKFRNVRGTTSSNVAVSLNCSSGVPCQGVELFDIDIKYIGNNTKDRTTHCA
CAHANAKFGGRIFPPPCAQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaattagaagctataatgtccaaggagctatattaggagttttgtgtatggtc
ttgctagaattgtgtctagttaacgctcatcagtttgatgatacatttgatcccatcact
cgtcgagctctggtggccggcacccagggccgcgggggaggccaaccagtcgacccggct
caacatcccgtggcaggcggagctggattcaaatgtgtagatgtatcaaattttaacatc
aagggagatggtcagtctgatgcaactgacggtgttatagcagcatggcaagaagtttgt
ggctgccctacaccatcaaaactagttatacccagagggacgtggttaacagcagaactt
gatttccgcggcccatgcgctgccccgcagattgtaatcgagattcaggggactctgcta
gccaagccagacaagcaatcattcccgaagggattctggatcaatatcatgggcgtccat
ggagtcgtcattaacggtggaggtacactcaatgcacaaggagagaaaatatggcacact
agaggtgttggcgaaaaaggcacgcctctacccgactctcttgtactagcccaatccaac
gactcgatagtcgaaaacatacacctggtgaatggcaagggattcaacatgaaggtatac
gaaaacgagaatgtgctgatacaaaatgttcacataacatctccagacgaaagcccaaac
acagacggaatccacatcggccgtatcaaaaatgtcagaatactcgactccttcctaggc
gtcggtgatgactgcatttccataggcgacggtagcatcgacgtctacatcaaaaacatc
atgtgcggtcctggacatggcatcagcgtggggagtcttgggaggttcacgtacgagact
gatgttcgcaacgtttgggtggaaaattgtacattcaccaaaacgctaaatggtgcaagg
atcaagacgttccatgactcgccacaaatagaggcgactaacattacatattgtaacctc
gtcatgaacgatgtctacaatcccatcattattgatcagaactatgccttcaataaacca
accccatcaagggtgaagctaagcaacatcaagtttaggaatgtaaggggaaccacgagc
tctaacgtggcagtgagcctcaactgcagcagtggtgttccgtgccaaggcgtagaacta
tttgatatcgatattaaatacattggcaataatacaaaagataggactactcactgtgct
tgtgcacatgctaacgcgaaattcggcggcagaattttcccaccaccctgtgctcagtga
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