Daucus carota (carrot): 108207836
Help
Entry
108207836 CDS
T05350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108207836
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108207836
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108207836
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108207836
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108207836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
ArfGap
UCH_1
Motif
Other DBs
NCBI-GeneID:
108207836
NCBI-ProteinID:
XP_063943018
LinkDB
All DBs
Position
2:complement(56067722..56076911)
Genome browser
AA seq
1128 aa
AA seq
DB search
MASESFVDKNAVFKKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSATHRSLGVHIS
FVRSTNLDSWTSDQLKMMAFGGNNRAQVFFKQHGWTDGGKTEAKYTSRAAELYKQLLLKE
VAKSSKEGTSLPTSPVGPQSVQAVNGFPDTKVQESLNGNSSENKETPDVTSSPRARAPHS
VLTSSVKKPLGAKKTGKTGGLGARKLSSKPSESLYDQKPEAAPVQVSTSISSTPAVKTSL
TSRFEYVDNTQVAAHKGPGGNQVVSHVTVPASSSFFSDYGMENGIHKKPSSSYKVEVKES
DEARKKFSNAKSISSSQFFGDQNKGFDHQVSLKKFSGSTAISSADLFGKNGNDLGIDISA
SDLINRLSFQAHQDLSSLKSIAGETGKKLTSIVSSIYYDEYSGNPNFYFCFSKFSNSMDT
HLENSEDDHSTSPDSVDYEHSSSDDSPETPDDDDDFDDSFSVPEVYIDANDLGDPSDDSL
WGDTKSCEDGDDDGNLICPSPINSYSVYSYRPLSYRWGQPWSAFDYRPWNSFSPVWFDEK
PSLVGAGLANLGNTCFLNAIVQCFTHTVRLVEGVRTYDHVTPCDRHINGICLICAFRGHV
EISLSSTGSVVSPWKLVDNLSYFSSSFQRYQQEDAHEFLQCFLDRLESSSSDSMFKEMIP
GEKKDNFVKQAFGGRLVSKLRCCNCGHVSDTYEPSIDLSLEIKDVTTLEAALESFTKLER
IEDPETKFTCENCKEEVSIEKQLLLDETPSIAAFHLKRFKNDGSYIEKIETFVGFPLALD
LQPYTNSSQNSDAELRYELYAIVVHNGFSATSGHYYCFIRSAPDTWYKFDDSTVVRVQEN
FVLVQDAYILFYAKQGTPWFSTYLENIKPFLNPHCSNTSPKSVLDNVDNRTSYPNHATNC
HYDVNGTSDGAPDNFLESPSGSKDDPVNGINYKDDSQQMSTLLPLGATSPTDTSVDAIKD
RTVTPEVTTTSPSGIIISLKDNCDGMRAISPSVLQQHSSNPDDIKSNDDNPQTPPRSSTA
DINRDESADVKLYENTDHQQLVNQVSAKKQSQNELESSEAQRLLRTCPDARRKSLSAAIA
GSLSEDSLMNKRRKVMEVSPNKDDSPSTANRKASLRSLARPLAAGLFR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagagagttttgttgataaaaatgctgttttcaagaaattgaaagcaaaatca
gagaacaagatgtgttttgattgcaatgccaagaatccaacttgggcctcagttacatat
gggatttttctgtgtattgattgctcagcaactcataggagccttggtgttcatatcagc
tttgtcaggtcaactaatttagactcatggacttcagatcagttaaaaatgatggcattt
ggtggtaataatcgtgctcaagttttcttcaaacaacatggttggactgatggaggcaag
actgaggctaagtacacatcaagggctgctgaattatacaagcaactgcttttgaaggaa
gttgctaaaagttctaaagaggggactagtttaccgacgtctccagttggtcctcagtca
gtacaagctgttaatggttttcctgataccaaagtccaggaatccttaaacggaaattct
tcagaaaataaagaaactcctgatgtgacctcttcgcccagagccagagcacctcattca
gttcttaccagttcagtgaagaagcctcttggtgccaaaaaaactgggaagactggcggg
ctcggtgctcgaaagcttagctctaagcctagtgagagtctttatgaccagaaacctgaa
gcagcacctgtacaagtttccacatcgataagtagcaccccagcagttaagacttctttg
acgtctcgctttgaatatgtagataacacccaagtggcagcacataagggtcctggaggg
aaccaagttgtcagtcatgtaaccgtgccagcatcatcaagctttttctctgattatggt
atggaaaatggaatccataagaagcctagctcatcatataaagttgaagtcaaagaaagt
gatgaggcgaggaagaagttctcgaatgcaaaatcgatttcatcatcacaattttttggg
gatcaaaacaaagggtttgaccatcaagtttccctgaagaagttctctggttccacagct
atatcaagtgcagatctttttggtaagaatggaaatgacttaggtattgatatttcagca
agcgaccttattaaccggctgtcttttcaggcacatcaagatctctcttcccttaagagt
attgctggagaaactgggaaaaagctcacctccattgtgtcgtcaatttattatgatgaa
tattcaggaaaccctaatttttatttctgtttctcaaaattctccaattcaatggacacc
cacctcgaaaacagtgaagatgatcacagcacgtctcccgattcagttgattatgaacat
tcttcgagtgatgattcgccagaaaccccagatgatgatgatgattttgatgactcattt
tcagttcctgaggtgtatattgatgctaatgatttgggtgatccttctgatgattcttta
tggggtgatactaaatcgtgtgaagatggtgatgatgatgggaatctaatttgtccatca
cccattaatagttattcggtgtattcgtataggcctctgagttataggtggggtcaacct
tggtctgcatttgattaccggccctggaattcgttttccccggtttggttcgacgaaaag
ccgtctttggtgggcgcagggctggcgaatttgggaaatacttgttttcttaatgcgatt
gtgcaatgctttacacatactgttcggttagttgagggtgttcgaacttatgatcatgtt
acgccttgcgaccgtcatattaatgggatctgtttaatctgcgctttccgaggtcatgtt
gaaatttcattgagttctacgggaagtgtggtttccccttggaaacttgttgacaacttg
agttatttttcttctagtttccagagatatcagcaggaggatgctcatgaattcctgcag
tgctttcttgacagacttgagagctcttctagtgattctatgtttaaggagatgatcccg
ggtgaaaagaaagataattttgtcaaacaggctttcggtggccgtcttgttagcaaactt
aggtgttgcaattgtggtcatgtgtctgatacttatgagccttcaattgatttgagcctg
gagattaaagatgtaaccaccctcgaggctgctcttgaatcatttacaaagctcgaaaga
attgaagatccagaaacaaagtttacgtgtgaaaactgcaaggaagaagtgtcgatcgag
aagcagcttttattagacgagactccttcaattgctgctttccacttaaagagattcaag
aatgatggctcatatattgagaaaattgaaacgtttgtagggtttccactggcattggac
ttgcagccctacactaacagcagtcaaaacagtgatgctgaactgagatatgaactatat
gcaattgttgtgcacaatggattctctgctacttctgggcattattactgtttcattcgt
tctgccccagacacctggtacaagtttgatgactcgacggttgtgcgggttcaagaaaat
tttgttcttgtgcaagatgcttatatattgttctacgcaaagcaggggacaccatggttt
tctacttacttggaaaatataaagccattcttaaatccacactgttccaacacttcaccg
aagtcagtgttagataatgtagacaaccgtacatcatatcccaatcatgctactaattgt
cattatgatgttaatggaaccagtgatggtgctcctgataattttttggagtctcctagt
ggatcaaaggatgacccggtcaatggcattaactacaaagatgattcacagcaaatgagt
actctattgccacttggggccacttctcccactgatacctcggttgatgcaattaaggac
agaactgttacacctgaagtgaccactacatcaccatctggaataattatatccttgaag
gataactgtgatgggatgagagcaatttcaccctcagttcttcaacaacacagctcaaat
ccagatgatatcaaaagcaatgatgataaccctcaaacaccaccaagatcttctactgca
gatataaacagagatgagtcagcagatgtgaagttgtacgagaatacagatcatcagcag
ttagtaaaccaggtctctgcaaaaaagcagtcacaaaatgagcttgaaagttcagaagca
cagagattgttgagaacatgtcctgatgcaaggagaaaatcattgtcggcagccatcgct
gggtcacttagtgaagattcacttatgaataaacggagaaaagtaatggaagtgagtcca
aataaagatgacagtccttcaactgccaacagaaaggctagccttcggtcattagcacga
cctttggctgcaggattgtttcgctga
DBGET
integrated database retrieval system
