Daucus carota (carrot): 108207893
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Entry
108207893 CDS
T05350
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03020
RNA polymerase
dcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108207893
09124 Replication and repair
03420 Nucleotide excision repair
108207893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108207893
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108207893
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108207893
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108207893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Motif
Other DBs
NCBI-GeneID:
108207893
NCBI-ProteinID:
XP_017233814
UniProt:
A0AAF1AKW4
LinkDB
All DBs
Position
1:42489759..42494112
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AA seq
113 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNVFEAEVARFS
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccccgatcgatacgagcgtttcgtcgtccctgagggaaccaagaaggtttcg
tatgaaagagacaccaagataatcaatgcagcttctttcactatcgagcgagaggatcac
actatcgggaacattgttcgcatgcaacttcatagggatgagaatgtgctttttgccggc
tacaagcttccgcatcctcttcagtacaaaattatagtcaggattcacaccactagccag
tcttcaccaatgcaggcatataatcaggcgatcaatgatcttgacaaggaactggatcat
ctaaagaatgtatttgaggctgaggtggcaaggttctcgtag
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