Daucus carota (carrot): 108207918
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Entry
108207918 CDS
T05350
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog isoform X1
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108207918
Membrane trafficking [BR:
dcr04131
]
Protein recycling
Others
EARP complex
108207918
Endosome - Golgi transport
Tethering complex
GARP complex
108207918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
COG5_N
EXOC6_Sec15_N
COG2_N
Motif
Other DBs
NCBI-GeneID:
108207918
NCBI-ProteinID:
XP_063943269
LinkDB
All DBs
Position
2:33803233..33822783
Genome browser
AA seq
790 aa
AA seq
DB search
MEGDEAPLDDKAKRMRDLLSSFYAIDSSSSHSTATLNHHALPFNASARYATLDTINTASF
DADRYMNLLVQKSNLDALLQRHFEMAAEIKNLDTDLQMLVYENYNKFISATESIKRMKGN
IVGMEANMEQLLEKILCVQSRSDGVNTSLHGKRDHIEKMHRTRNLLRKVQFIYDLPTRLG
KCIKAEAYADAVRLYTGAMPIFKAYGDSSFKDCKRASEQEVSVIIKTLQRKVLADSESVQ
ARAEAVMLLNQLNFPVDNLKDKVLKKLEQVLGDMNLESGEVAQLLDNFDESSKKEIVPEL
SPENSQTVSTREFVEAARAYKVIFPDSREQLIRLMKDLIMKHFEVTQRHIDQQISSTDLL
EMLRSIWNNVLVMDEILPEAAFPELSLKGARVAVEHFVTISFSRLLLNITDPLTKLQRRQ
EGLGEEYSFQGVLEASKKSVIQDSMSVLLDFRQLLEENLGLLLNLNKLIIEWVHRGFQDL
FKKLDDQFRSLSGLNTLAGGVTEGSQSEKVLPGIVLVMSELSIFIEQIAIPRITEEMAVS
FSESGARGYNSGPVFVSEEICHTFHSASEKFLHLYIKMRMKKISAILRKRFTAPNWLKHK
EPREVHMFVDILLQELKVIGNNVKQILPQGPHVKHRHTDSNGSGSSSLSNSFNNDKLSKF
NMHRTRNQLLETHLINLFKQKLKIFTKVEHTQESVYSTIVKLCLKSLHELVRLQTFNRSG
FQQIQLDMQFLRSMLKETAEDEAAVNFLLDEVIVAAGTRCLDPILLDSPVLDKLIQTKLA
KNSEEIQVSP
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgaggcgccattggacgacaaggccaaaagaatgagagatcttttatcc
agtttctacgctattgattcttcttcctctcattccactgcaactcttaatcaccatgca
cttccttttaacgcatccgccagatacgcaactctcgataccatcaacaccgcctctttc
gatgccgatcgatacatgaatcttctcgtgcaaaagtcaaatttggacgcgttgcttcag
cgacattttgaaatggctgctgagataaagaatcttgacactgacttgcaaatgctggtt
tatgaaaattataacaaattcatcagtgctacagaatcaattaaaagaatgaaaggcaat
attgttggcatggaagctaacatggagcagctcttagaaaagatattatgtgtgcaatct
agaagtgatggggtgaatacttcgcttcacggaaagagagatcatatagagaaaatgcat
cgtacccgcaatcttctgcgtaaagttcagttcatatatgatctaccaaccagacttggc
aagtgtatcaaagctgaagcctatgcagatgcagtgaggttgtatactggagccatgcca
attttcaaggcatacggggactcatcattcaaagactgtaagagagcttctgaacaagaa
gtatctgtaattataaaaaccttgcagaggaaggttttagccgattctgagtccgtacag
gcaagagctgaagctgtaatgcttttaaatcagttaaatttcccggttgacaatttgaaa
gacaaagtacttaaaaagttggaacaagtccttggggatatgaatcttgagtccggagaa
gtagctcaactcctggataattttgatgaatcctctaaaaaagaaatcgttcccgaatta
agtcctgagaattctcaaacggtatctactcgtgagtttgtggaagctgcccgtgcttat
aaagtaatatttcctgattcgagagagcaactaatcaggcttatgaaggatttaataatg
aagcactttgaagtcacccaaagacacattgaccaacaaatttcttcgacagatctttta
gaaatgctgcgtagtatctggaataatgtgctcgtgatggatgaaattttgcccgaggct
gcttttccggagttatctttaaagggtgcccgtgttgctgtcgagcacttcgttactatt
tcattttctcgtcttctacttaatattactgatcctcttacgaaactccaaaggaggcag
gagggtctaggagaggaatactcttttcagggtgttctagaggccagtaaaaaatctgta
atccaggacagtatgagtgtcttactggacttccgtcagcttcttgaagaaaatctgggc
ctgcttctgaatttaaataaattgattattgaatgggtacatcgaggatttcaagacttg
ttcaaaaaacttgatgatcagttccgatcactttcaggactaaacaccttggctggagga
gttacagagggttcacagagtgaaaaagtgcttcctgggattgttctagtgatgtctgaa
ctctcaatttttattgaacaaattgctataccaagaattacagaggagatggcagtttct
ttttctgaaagtggcgcaagaggatataattctggacctgtctttgtttctgaagaaatt
tgtcatactttccattcagcgagtgaaaagttcttgcacctttatataaaaatgaggatg
aagaaaatatcagctattttgaggaagaggtttacagcgccaaattggttaaagcacaaa
gaacctcgagaagttcatatgtttgtagatattttacttcaagagttgaaggtaatcgga
aacaatgtcaagcagattttacctcaaggaccacacgttaagcaccgacatacagacagc
aatgggagtggcagttcatcactgagtaactcatttaataatgataaattgagcaaattt
aatatgcacaggaccaggaaccagcttctggaaactcatctgataaatttatttaagcaa
aagctgaaaatattcactaaagttgaacatacacaggaatccgtatattcaactattgta
aaactttgcttgaaaagtttgcatgagttggtcaggctccagacatttaacaggagcggt
tttcagcaaattcaattggatatgcagttcttaaggtctatgttaaaggaaactgctgaa
gatgaagctgctgtcaatttcctgcttgacgaggtaatcgtcgctgcagggacacgttgt
cttgatccaattcttttggattctccagttttggacaaactgatacaaacaaagttggcc
aagaattcggaagaaattcaagtttcgccttag
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