KEGG   Daucus carota (carrot): 108208094
Entry
108208094         CDS       T05350                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dcr01009]
    108208094
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dcr03036]
    108208094
Enzymes [BR:dcr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108208094
Protein phosphatases and associated proteins [BR:dcr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108208094
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108208094
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel RRXRR
Other DBs
NCBI-GeneID: 108208094
NCBI-ProteinID: XP_063944173
LinkDB
Position
2:52582050..52592216
AA seq 1002 aa
MDATINRNCEREVECEKNIKVSARWNPADPCRPTMDAAPVFYPTCEEFQDTLGYIAKIRP
VAEGFGICKIVPPSSWKPPCPLKEKSIWENAKFPTRIQQVDLLQNREPMRKKRGRKRKRQ
RNSKIDNIRESPGIDDPSIDDLIDTEEKFGFQTGSDFTFQDFQKLAHNFKECYFGIRDTM
LKDTAGQSPNGQTKRWEPSIEDIEGEYWRIIEKPTDEVEVYYGADIETAVFGSGFPKKSP
SLTENISDTYVSSGWNLNNFPRLPGSVLCFEESDISGVMVPWLYVGMCFSSFCWHVEDHH
LYSLNYLHWGDPKVWYGVPGTHASDLEAAMRKHLPDLFDEQPGLLHELVTQMSPSILMSE
GVPVHRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPIDWLQHGQSAVEAYSEQHRK
TSLSHDKLLFESAREAIRALWELSIMNTENPKNMRWKSVCGKDGLLTKAIKARVEAEKKR
IEHLPLHLKPQKMEKDFDLTCERECFSCFYDLHMSVACCKCSPDQFACLRHATILCSCEK
NDVFVVVRYTMDELSTLIKALEDEAGALKAWPSVDEGLVCINCEDSISGISSAKQNDDPA
KFPKRDETLQEDTADGCMSQVVTNKLKEDVVGKSNDTMTINQSYTVISAVVERMLNHKSD
VCYDNMMANEGDACNNVIREAFHKADSRQKLDSLQLGGCPGSSVSYVLPKNVCPSPSMDV
ADRGASNNDLTFGCMSSNEVVDQLGIKDTHSVRNGSLQKFSFDVHPINIGNAVSGRLWCN
KQVIYPKGFKSYVKFFNVLNPTQISGYISEVVDGGLIGPLFKVTLEESPSKSFVDTSAQK
CWEMVIDELNQELSRCQSIGKAVFPSLDPQSINGLAMFGFLSPHIIKEIEALDPNHHCSE
YWNYKLPMKEKLTDNTYELPDAKKFNYHTGSNLSGGNTTPLTNTEISIGGQAHSINKECM
PVLERLMQNANPEELNIVQRVFCVDSQTAEWKAALAKLNEEV
NT seq 3009 nt   +upstreamnt  +downstreamnt
atggatgcaaccatcaatcgaaactgtgaacgggaagttgagtgcgaaaagaacatcaag
gtatctgctagatggaatcctgctgacccttgtaggccaactatggatgccgcgcctgta
ttttatccaacttgtgaggaatttcaggatacccttggttacatagctaagatacggcca
gtggctgaaggatttggtatttgtaagattgtaccaccttcttcctggaagccaccatgt
cctcttaaagagaagagtatatgggaaaatgctaaattcccaactcgaatccagcaagtg
gatttgcttcaaaatagggagccaatgaggaaaaaaagaggtcgtaagcgtaaacgacaa
agaaattcaaagattgacaacataagggaatcccctggcattgatgatcctagcatagat
gatttgatcgacacagaagagaaatttggttttcaaactggatcagatttcacttttcag
gattttcaaaaacttgcgcataactttaaagagtgttattttgggatcagggatacaatg
ctgaaagatactgctggtcagagtcccaatgggcaaacgaaaagatgggaaccctcaatt
gaagatatcgaaggcgaatactggcgtatcattgaaaagccaacggatgaagttgaggta
tactatggagctgatatagaaaccgcagtatttgggagtggttttccgaaaaagtcacca
tcgctaactgaaaacatatcagatacatatgtgtcttcaggttggaatttgaataacttt
ccccgccttccaggttcggttctttgttttgaagaaagtgatatctccggagttatggtg
ccgtggctttatgtaggaatgtgcttttcatcattttgctggcatgtggaagatcaccac
ttgtattccttaaattatctacactggggcgatcctaaagtctggtatggcgtcccggga
acacatgcttctgatctggaggctgcaatgagaaagcatcttccagatttattcgatgaa
caacctggtttgcttcatgaactggttactcagatgtctccatcaattttaatgtccgag
ggtgtgccagtgcatcgagttgtacagcattctggggagtttgttcttacatttccaaga
gcatatcactccggattcaattgtggcttcaactgcgctgaagctgtgaatgttgctcct
attgattggctacagcatgggcaaagtgcagtagaggcgtatagcgagcaacaccgaaaa
acatcactttctcatgacaaactgctatttgaatcagccagggaagctattcgagcatta
tgggaactgtcaataatgaacactgaaaatccgaagaatatgaggtggaaaagcgtgtgt
gggaaggacggactgctgaccaaggcaatcaaggcaagggttgaggcagaaaagaaaagg
attgagcatcttccgctccatttaaagcctcaaaagatggaaaaagactttgatttaaca
tgtgagagagaatgcttttcatgtttctatgacttacacatgtctgttgcttgctgcaaa
tgctcaccggatcagtttgcctgtcttagacatgcaaccattttatgctcttgtgaaaag
aatgatgtatttgtcgttgtccgatatacaatggatgaattgagcacattaatcaaagcg
ttggaagatgaagcgggtgccttaaaagcatggccatcagtagatgaaggattggtttgc
ataaattgtgaagacagtatttctggcattagctctgccaagcaaaatgatgatccagca
aaatttcctaaaagagacgaaactttgcaggaagacactgctgatggatgtatgtctcaa
gtagtgactaataagctaaaagaggatgttgttggcaagagcaatgatactatgacaatc
aatcaaagttacactgttatatctgctgtagtagaaaggatgctgaatcacaaatcggat
gtctgttatgataatatgatggcaaatgaaggcgatgcttgtaacaacgttatacgagaa
gcttttcacaaggcagattcaaggcaaaagctagattccctgcagcttggtggttgtcct
ggttcttctgtttcatatgttctcccgaaaaatgtgtgtccttccccttcaatggatgtt
gcagatcgtggtgcttctaataatgatttgacttttgggtgcatgtcaagcaatgaggtt
gttgaccaattgggtataaaggacactcactcagtcagaaatggttcattacagaagttt
agttttgatgttcatcctataaatattggaaatgcagtttctggaaggctttggtgcaat
aagcaggtgatatatccaaaaggatttaaaagttatgtgaagttctttaatgtgctgaat
ccaacacaaataagtgggtacatatcagaagtcgtagatggtggccttattggtccttta
tttaaggttacattagaagagtctccaagtaagagcttcgtagatacttcggcacaaaag
tgctgggaaatggtgatagacgaacttaaccaagaactttcaaggtgccaaagcataggg
aaagcagtatttccctctcttgatccccaaagcatcaatggacttgcaatgtttgggttt
ctctctccgcacatcattaaggaaattgaggctcttgatccaaaccatcactgctcggag
tactggaactacaagcttccgatgaaagagaaacttaccgataacacttatgaactgcca
gatgctaagaaattcaattaccatactggatcaaatttatctggaggaaatacaacacca
ctaacaaatacagaaatcagcataggagggcaggctcattcgataaataaggagtgtatg
cctgtgttagaacgtttgatgcagaacgccaatcctgaagaactgaatatagtgcagaga
gtattttgcgtggattcgcagaccgctgaatggaaagcagcacttgccaaattgaacgag
gaggtctaa

DBGET integrated database retrieval system