Daucus carota (carrot): 108208604
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Entry
108208604 CDS
T05350
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108208604
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
108208604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
HetR_C
MCPsignal
DUF948
Prominin
V-SNARE
Occludin_ELL
ZW10_C2
DUF2203
PHM7_cyt
Syntaxin_2
VBS_C3G9
DUF7605
Motif
Other DBs
NCBI-GeneID:
108208604
NCBI-ProteinID:
XP_017234627
UniProt:
A0AAF0WHT4
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All DBs
Position
2:complement(56450621..56454566)
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AA seq
262 aa
AA seq
DB search
MSSLSSISEELDELQGQVSDIFRALTNGFQKLDKIKDTSRQSRQLDDLTDKMRECKRLIK
EFDIEVKEMEDKNDAGTNKMLNERKQSMVKELNKFVAQKKQYASSLENKRADLFERPDNS
PTENNGLLASAMSNQELVDHGHKMMDETDQSIERSKQVIAETVEVGTETAATLKAQTEQM
SRIVNELDSINFSIKKASKLVKEIGRQFATDRCIVFMLFLIVLGVIAILIVKLVKPDNQD
TQEVPGLAPPVPTNRRLLWNPK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagttccttatcttcaattagcgaagagctcgatgagcttcaaggacaagtttctgat
atttttcgagctttaacaaatggattccagaagttggacaagattaaagatacgagtagg
caaagtaggcagttggatgatcttacggataaaatgcgcgaatgcaaaaggcttattaaa
gaatttgatatagaagtgaaggaaatggaggataaaaatgatgcaggcaccaataagatg
cttaatgagagaaaacaatcaatggtgaaggagttgaataaatttgttgctcaaaaaaag
caatatgccagtagtcttgaaaacaagcgcgctgatctgtttgagaggcctgataatagc
cccacagaaaataatggtttactagcttcagctatgtcgaatcaagagctagtggatcat
ggacataaaatgatggatgagactgaccaatccattgagaggtcaaagcaggttattgca
gagactgttgaggttggaacagaaactgcagcaacactcaaggcacagacagagcaaatg
agcaggattgttaatgaactggattctatcaatttttcaatcaaaaaggcttctaaactg
gtcaaggaaattggtagacagtttgcaaccgatcggtgtattgtcttcatgctcttcctc
attgtgttgggtgttatagccatcttaattgtgaagcttgtgaaaccagataatcaagac
acacaggaggtccctggactagctcctccagtacctaccaatcgcagactgctctggaat
cccaagtaa
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