Daucus carota (carrot): 108208635
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Entry
108208635 CDS
T05350
Name
(RefSeq) coatomer subunit beta'-2
KO
K17302
coatomer subunit beta'
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108208635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108208635
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108208635
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108208635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
WD40_RFWD3
HEAT_GCN1
Beta-prop_Nup120_160
WD40_like
WD_LRWD1
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
108208635
NCBI-ProteinID:
XP_017234659
LinkDB
All DBs
Position
2:complement(50715444..50726500)
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMSKSFEVTELPV
RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSADD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKSSRRVVIGYDEGTIMVKIG
REEPVASMDSSGKVIWAKHNEIQTVNIRSVGSEYEVSDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVACGDGEYIIYTALAWRNRSFGSALEIVWSTDGEYAVRESTSRIKIFSKNFQ
EKKSIRPTFSAERIYGGTLLAMCSNDFICFYDWSECRLIRRIDVTVKNLYWADSGDLVAI
ASDTSFYMLKFNRDVVSAHLDSGRSADEEGVEDAFELLYEINERVRTGVWVGDCFIYNNS
SWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVM
RGELEQANQVLPSIPKEQLNSVARFLESRGMIEDALEVATDPDYRFELAIQLGKLEIAKE
IAAVAQSESKWKQLGELAMSAGMMDMAEDCLRHANDLSGLLLLYSSLGDSEEISKLALLA
KDLGKNNVAFLCLFMLGKVEECLQLLIESNRIPEAAIMARSYLPSKVSEIIALWRKDLVK
VNKKAAESLADPEEYPNLFEDWQVALGVESKVAETRNNYPPAVEYINHINRSNVNLVEAF
RNMHVDEEELLENGGSDVENPENNVNEMQEDLKEGHDEAVVLDADSADGAVLVNGNEAEE
QWVLTPRHQDQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagacttgaaatcaagagaaaacttgctcagaggtctgaaagagttaaatct
gtcgatctacatccaactgagccatggattctcgcgagtttgtactctggcactgtttgc
atatggaattaccagtctcagactatgtcaaaatcattcgaggtgacagagttaccagtt
agatcggccaagtttataccacgcaagcagtgggttgttgctggtgcagatgatatgtat
attcgtgtatacaattacaatacgatggacaaggtcaaagtgtttgaggcgcatactgac
tatattaggtgtgttgctgtccatccaacacttccttatgtgctctcttcagctgatgac
atgcttataaagctctgggactgggacaagggatgggtgtgcactcaaatttttgagggt
cattcacattacgtcatgcaagttacatttaatccgaaagacaccaatacttttgcaagt
gcttcccttgatcgtaccataaaaatttggaatcttggatctcctgatccaaatttcaca
ctggatgcccatctaaaaggtgtcaattgtgtagattatttcactggtggagataagcct
tatctcatcacgggttctgatgatcacactgctaaggtgtgggattaccaaaccaagagt
tgtgttcagacgctagaaggccatacacacaatgtttctgctgtttgttttcatcctgaa
cttcccataataattacaggttcagaggatggtactgtccgtatatggcactcaaccact
tataggctcgagaacaccctaaattatggtcttgaaagagtttgggccgttggatacatg
aaaagctcacgaagggttgtaattggttatgatgaagggaccattatggtgaaaattgga
cgagaggaacctgtagctagtatggatagcagcggaaaagttatttgggcaaaacataac
gagatccaaactgttaacattagaagcgtgggatcagagtatgaggtttctgatggagaa
agattgcctctggcagtcaaggagttgggcacctgtgatctatatccacaaagcttgaag
cataatcccaatgggcggtttgttgttgcatgtggagatggtgaatacatcatatataca
gcactggcatggagaaatagatcatttggttcagcactggagattgtttggtcaactgat
ggagaatatgctgttagggaaagtacttcgagaatcaaaatatttagcaaaaatttccag
gaaaagaaaagtatccggccaacattttctgctgagcgcatatatggtggaaccttattg
gcaatgtgttcaaacgattttatctgtttttatgattggtccgagtgcaggttgattcga
agaattgatgtcacggtcaaaaatctttactgggctgatagtggcgacctggtggctatt
gccagtgatacatcattctacatgctgaagtttaatagagatgtagtttcggctcatctg
gatagtggaagatcagcggacgaagaaggtgtagaagatgcctttgagctcctatacgag
ataaatgaacgagtcaggacaggagtttgggttggggattgtttcatttataacaactcc
tcttggaggctaaattactgtgtcggcggagaggtaacgacaatgtatcatttggaccgg
cctatgtatctgcttggatatcttgcaaatcaaagtagagtgtatcttatcgataaagag
ttcaatgtaattggatatacgttgctccttagcttgattgagtacaagacactagtgatg
cgtggtgaactggaacaagctaatcaggttctaccttcgataccaaaagagcaacttaat
agtgtggctcgtttcttggaatcacgaggaatgatagaggatgccctggaagttgccaca
gatcctgactacagatttgaactagctatacagctgggcaaacttgagattgctaaggaa
attgccgctgtagcacagagtgaatccaaatggaagcaattgggtgaattagctatgtct
gctggaatgatggatatggctgaggattgtttaaggcatgcaaatgacttgagtggctta
ttgctactctactcttctttaggagattctgaggaaatatctaagcttgctttgcttgcc
aaagatcttgggaaaaacaatgttgcatttctttgtttattcatgttgggtaaggtggaa
gagtgtctacagctgttaattgaaagcaatcgcatacccgaagctgctataatggcaaga
tcttatcttcctagcaaggtttctgaaataattgctctttggaggaaggatcttgtcaag
gttaataaaaaagctgcagaatctttggctgatcctgaagagtatccaaatttgtttgag
gattggcaagtcgcacttggtgttgaatcaaaagttgcagagacgaggaataattatcct
ccggctgtggagtatataaaccacatcaatagatcaaatgtcaatcttgtggaggcattc
agaaacatgcatgtggacgaagaggaactacttgaaaatggaggctcagatgttgagaat
cctgaaaacaatgtcaatgagatgcaagaagatctaaaagagggtcatgatgaggctgtt
gtgttggatgctgactctgcagatggtgcagtactcgtcaatggcaacgaagctgaagaa
cagtgggtgcttacaccacgtcaccaggatcagtga
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